Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C08
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    27   0.36 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.9  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.6 bits (56), Expect = 0.36
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 66  RYITFTRRSSLGQNLPMTEQR 128
           RYIT  R++ L QNL ++E++
Sbjct: 238 RYITIRRKAELAQNLQLSERQ 258


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 353  RKSNKLRNRLSSLPKWKLRRQFMRN-GLRMLNQL 255
            R++ +L +    + +W+ R++ +RN G++ML  L
Sbjct: 1141 REAARLEDGRRRVARWRERQRMIRNGGIQMLRAL 1174


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 136  CPCRCSVMGRFCPR 95
            CPC  +V GR C R
Sbjct: 1005 CPCNDNVEGRRCDR 1018


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,783
Number of Sequences: 2352
Number of extensions: 6226
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)