SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C08
         (417 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071971-1|AAH71971.1|  295|Homo sapiens ribosomal protein SA ps...    32   0.67 
X61156-1|CAA43469.1|  285|Homo sapiens laminin-binding protein p...    32   0.88 
X15005-1|CAA33112.1|  300|Homo sapiens protein ( Human mRNA for ...    32   0.88 
U43901-1|AAC50652.1|  295|Homo sapiens 37 kD laminin receptor pr...    32   0.88 
S37431-1|AAB22299.1|  295|Homo sapiens 67 kda laminin receptor p...    32   0.88 
M14199-1|AAA36165.1|  135|Homo sapiens protein ( Human laminin r...    32   0.88 
J03799-1|AAA36161.1|  295|Homo sapiens protein ( Human colin car...    32   0.88 
BT007219-1|AAP35883.1|  295|Homo sapiens laminin receptor 1 (rib...    32   0.88 
BC107567-1|AAI07568.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC073863-1|AAH73863.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC071970-1|AAH71970.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC071969-1|AAH71969.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC071968-1|AAH71968.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC071693-1|AAH71693.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC070263-1|AAH70263.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC068062-1|AAH68062.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC066941-1|AAH66941.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC062714-1|AAH62714.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC053370-1|AAH53370.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC050688-1|AAH50688.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC034537-1|AAH34537.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC013827-1|AAH13827.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC010418-1|AAH10418.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC008867-1|AAH08867.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
BC005391-1|AAH05391.1|  295|Homo sapiens ribosomal protein SA pr...    32   0.88 
AF503367-1|AAM33304.1|  295|Homo sapiens multidrug resistance-as...    32   0.88 
AF284768-1|AAK69721.1|  295|Homo sapiens laminin receptor-like p...    32   0.88 
U36484-1|AAC50313.1|  125|Homo sapiens laminin-binding protein p...    29   8.2  
BC101397-1|AAI01398.1|  416|Homo sapiens ring finger protein 180...    29   8.2  
BC101279-1|AAI01280.1|   96|Homo sapiens RNF180 protein protein.       29   8.2  
BC101278-1|AAI01279.1|  416|Homo sapiens ring finger protein 180...    29   8.2  
BC101277-1|AAI01278.1|  416|Homo sapiens ring finger protein 180...    29   8.2  
AK090756-1|BAC03514.1|  416|Homo sapiens protein ( Homo sapiens ...    29   8.2  

>BC071971-1|AAH71971.1|  295|Homo sapiens ribosomal protein SA
           pseudogene protein.
          Length = 295

 Score = 32.3 bits (70), Expect = 0.67
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPAMEDWS---AAPTAQATEWVGATTDWS 295


>X61156-1|CAA43469.1|  285|Homo sapiens laminin-binding protein
           protein.
          Length = 285

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 181 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 240

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 241 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 285


>X15005-1|CAA33112.1|  300|Homo sapiens protein ( Human mRNA for
           potential laminin-binding protein (nem/1cHD4). ).
          Length = 300

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 196 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 255

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 256 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 300


>U43901-1|AAC50652.1|  295|Homo sapiens 37 kD laminin receptor
           precursor/p40 ribosome associated protein protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>S37431-1|AAB22299.1|  295|Homo sapiens 67 kda laminin receptor
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIGKEEQAAAEKAVTKEEFLGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>M14199-1|AAA36165.1|  135|Homo sapiens protein ( Human laminin
           receptor (2H5 epitope) mRNA, 5' end. ).
          Length = 135

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 31  REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 90

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 91  ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 135


>J03799-1|AAA36161.1|  295|Homo sapiens protein ( Human colin
           carcinoma laminin-binding protein mRNA, complete cds. ).
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BT007219-1|AAP35883.1|  295|Homo sapiens laminin receptor 1
           (ribosomal protein SA, 67kDa) protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC107567-1|AAI07568.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC073863-1|AAH73863.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC071970-1|AAH71970.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC071969-1|AAH71969.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC071968-1|AAH71968.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC071693-1|AAH71693.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC070263-1|AAH70263.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC068062-1|AAH68062.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC066941-1|AAH66941.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEGQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC062714-1|AAH62714.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC053370-1|AAH53370.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC050688-1|AAH50688.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC034537-1|AAH34537.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC013827-1|AAH13827.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC010418-1|AAH10418.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC008867-1|AAH08867.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>BC005391-1|AAH05391.1|  295|Homo sapiens ribosomal protein SA
           protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>AF503367-1|AAM33304.1|  295|Homo sapiens multidrug
           resistance-associated protein MGr1-Ag protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSAQPATEDWS---AAPTAQATEWVGATTDWS 295


>AF284768-1|AAK69721.1|  295|Homo sapiens laminin receptor-like
           protein LAMRL5 protein.
          Length = 295

 Score = 31.9 bits (69), Expect = 0.88
 Identities = 25/112 (22%), Positives = 36/112 (32%), Gaps = 2/112 (1%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWIENVEP-VASWAE 241
           R+  WEV+ DL+FYRD                                   +P VA W+E
Sbjct: 191 REHPWEVMPDLYFYRDPEEIEKEEQAAAEKAMTREELQGEWTAPAPEFTATQPEVADWSE 250

Query: 240 DSXXXXXXXXXXXXXXAQEDWASQ-VQDEWSTXXXXXXXXXPSWGGSAQDWT 88
                             EDW++Q   ++WS            W G+  DW+
Sbjct: 251 ----GVQVPSVPIQQFPTEDWSTQRATEDWS---AAPTAQATEWVGATTDWS 295


>U36484-1|AAC50313.1|  125|Homo sapiens laminin-binding protein
           protein.
          Length = 125

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -1

Query: 417 RDQRWEVVVDLFFYRD 370
           R+  WEV+ DL+FYRD
Sbjct: 107 REHPWEVMPDLYFYRD 122


>BC101397-1|AAI01398.1|  416|Homo sapiens ring finger protein 180
           protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 181 VFLCWGCTKCSRSSGC 228
           +  CW C KC  SSGC
Sbjct: 19  ILRCWKCRKCIASSGC 34


>BC101279-1|AAI01280.1|   96|Homo sapiens RNF180 protein protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 181 VFLCWGCTKCSRSSGC 228
           +  CW C KC  SSGC
Sbjct: 19  ILRCWKCRKCIASSGC 34


>BC101278-1|AAI01279.1|  416|Homo sapiens ring finger protein 180
           protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 181 VFLCWGCTKCSRSSGC 228
           +  CW C KC  SSGC
Sbjct: 19  ILRCWKCRKCIASSGC 34


>BC101277-1|AAI01278.1|  416|Homo sapiens ring finger protein 180
           protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 181 VFLCWGCTKCSRSSGC 228
           +  CW C KC  SSGC
Sbjct: 19  ILRCWKCRKCIASSGC 34


>AK090756-1|BAC03514.1|  416|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33437 fis, clone BRACE2021541, weakly similar to
           PROTEIN-TYROSINE PHOSPHATASE YVH1 (EC 3.1.3.48). ).
          Length = 416

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 181 VFLCWGCTKCSRSSGC 228
           +  CW C KC  SSGC
Sbjct: 19  ILRCWKCRKCIASSGC 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,069,872
Number of Sequences: 237096
Number of extensions: 826738
Number of successful extensions: 15467
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 15437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15467
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -