Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C07
(488 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 0.49
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 25 0.49
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 25 0.49
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like prote... 22 2.6
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 21 6.0
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 6.0
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 21 7.9
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 24.6 bits (51), Expect = 0.49
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 394 HLQEKYP-VGKKRCPP*FIPLHFHHL*NPRKNKTIQTSKGTILQN 263
H ++ Y G + PP +++HH P+ N I T G N
Sbjct: 43 HYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNPIINTETGLSYTN 87
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 24.6 bits (51), Expect = 0.49
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 394 HLQEKYP-VGKKRCPP*FIPLHFHHL*NPRKNKTIQTSKGTILQN 263
H ++ Y G + PP +++HH P+ N I T G N
Sbjct: 43 HYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNPIINTETGLSYTN 87
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 24.6 bits (51), Expect = 0.49
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 394 HLQEKYP-VGKKRCPP*FIPLHFHHL*NPRKNKTIQTSKGTILQN 263
H ++ Y G + PP +++HH P+ N I T G N
Sbjct: 43 HYEDPYGYTGSEETPPSPQEVYYHHQTIPQDNPIINTETGLSYTN 87
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 217 CVITTFIYLRLTRVFRSEVLCLLKS----VSFYFSLDFISDGNEEV*IMADIFSYLLDIS 384
C+I F +L +FRS +C KS +F + F ++ V I IF L D+
Sbjct: 134 CLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLD 193
Query: 385 L 387
+
Sbjct: 194 V 194
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 217 CVITTFIYLRLTRVFRSEVLCLLKS----VSFYFSLDFISDGNEEV*IMADIFSYLLDIS 384
C+I F +L +FRS +C KS +F + F ++ V I IF L D+
Sbjct: 134 CLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLD 193
Query: 385 L 387
+
Sbjct: 194 V 194
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 217 CVITTFIYLRLTRVFRSEVLCLLKS----VSFYFSLDFISDGNEEV*IMADIFSYLLDIS 384
C+I F +L +FRS +C KS +F + F ++ V I IF L D+
Sbjct: 134 CLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLD 193
Query: 385 L 387
+
Sbjct: 194 V 194
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +1
Query: 217 CVITTFIYLRLTRVFRSEVLCLLKS----VSFYFSLDFISDGNEEV*IMADIFSYLLDIS 384
C+I F +L +FRS +C KS +F + F ++ V I IF L D+
Sbjct: 134 CLIFAFWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIVFFTETLHTVGIALLIFYILPDLD 193
Query: 385 L 387
+
Sbjct: 194 V 194
>AJ969955-1|CAI94742.1| 160|Tribolium castaneum torso-like protein
protein.
Length = 160
Score = 22.2 bits (45), Expect = 2.6
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 354 RHDLYLFISITYKIQGKIKRYRLQKAQYF 268
R +YL I K QG +LQ QYF
Sbjct: 111 RRSIYLQIKERLKTQGISHLDKLQLGQYF 139
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +2
Query: 392 MLGSARRGAEGHGRLMDPTARNSMWRIG 475
M G + R + ++M+P + ++ W+ G
Sbjct: 11 MRGGSVRTLNNYQQVMEPRSPHTAWQFG 38
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 325 DGNEEV*IMADIFSYLLDIS 384
D +E + ++ DI+S LLD++
Sbjct: 341 DNDEVLQVLEDIYSDLLDLT 360
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 141 TNVSVARCGGRPRHLTCF 88
TN+ V GG+P L+ F
Sbjct: 433 TNIEVQAKGGKPNVLSTF 450
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,382
Number of Sequences: 336
Number of extensions: 2369
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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