Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C04
(556 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 296 3e-79
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 277 1e-73
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 236 2e-61
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 194 9e-49
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 190 2e-47
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 182 4e-45
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 177 1e-43
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 173 2e-42
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 155 9e-37
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 154 1e-36
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 136 4e-31
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 3e-21
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 85 1e-15
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 80 3e-14
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 73 5e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 70 4e-11
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 3e-09
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 60 4e-08
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 3e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 6e-07
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 44 9e-07
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 1e-04
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 0.007
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 38 0.21
UniRef50_Q38FY2 Cluster: Protein kinase, putative; n=1; Trypanos... 36 0.63
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.63
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 1.5
UniRef50_O07653 Cluster: Cellulase B; n=3; Gammaproteobacteria|R... 34 2.6
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 33 3.4
UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein NCU087... 33 3.4
UniRef50_UPI0000F2BEF5 Cluster: PREDICTED: similar to Rho guanin... 32 7.8
UniRef50_Q7R2S3 Cluster: GLP_291_73636_75723; n=2; Giardia intes... 32 7.8
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 296 bits (726), Expect = 3e-79
Identities = 135/165 (81%), Positives = 146/165 (88%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKG
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKG 165
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 277 bits (679), Expect = 1e-73
Identities = 123/165 (74%), Positives = 139/165 (84%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
G EVTGDEYNVE +D PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 236 bits (578), Expect = 2e-61
Identities = 110/165 (66%), Positives = 128/165 (77%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY TG DS Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
G E+TG++YNVE + F+ LD+GLARTTTG+++F MKG
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKG 164
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 194 bits (474), Expect = 9e-49
Identities = 91/162 (56%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Frame = +2
Query: 77 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 251 VAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGAT 430
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y TG Y G T
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 431 EVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
E G++Y+VE D F+C+LD GL RT+TGARVF A+KG
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKG 174
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 190 bits (462), Expect = 2e-47
Identities = 92/172 (53%), Positives = 118/172 (68%), Gaps = 6/172 (3%)
Frame = +2
Query: 59 KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKD 238
+M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD
Sbjct: 23 EMPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKD 82
Query: 239 VTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLY 418
+ Q+ ++I GD +V AAY+HELP +GI+ GLTNYAAAY TG +
Sbjct: 83 IIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKF 142
Query: 419 TGATEVTGDEYNVEPVDNGPG------AFRCYLDVGLARTTTGARVFGAMKG 556
GA E G V + G F+ LDVGLARTTTGARVFG +KG
Sbjct: 143 QGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKG 194
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 182 bits (444), Expect = 4e-45
Identities = 80/89 (89%), Positives = 87/89 (97%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIK 328
TCQ+AYSRIEGD I+CAAYSHELPRYG+K
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 177 bits (431), Expect = 1e-43
Identities = 90/168 (53%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
CQ+A S IEGD I+ A S EL RYGI VGL NYAAAY TG D+ +
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 422 GATEVTGD---EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
G +VT + E + + + +LDVG+ RTTTG RVF A+KG
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKG 168
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 173 bits (421), Expect = 2e-42
Identities = 86/165 (52%), Positives = 107/165 (64%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY TG D Y
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
G + G N++ P F LD+GL R+T G RVF A+KG
Sbjct: 121 GNKTIDG---NLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKG 160
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 155 bits (375), Expect = 9e-37
Identities = 69/148 (46%), Positives = 96/148 (64%)
Frame = +2
Query: 113 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 292
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 293 AYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEPVDN 472
A S+EL R+G+ GL +YAAAY TG D++Y G T+V G +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 473 GPGAFRCYLDVGLARTTTGARVFGAMKG 556
F+ LD GL RTTTG RVFG +KG
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKG 454
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 154
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 154 bits (374), Expect = 1e-36
Identities = 79/161 (49%), Positives = 101/161 (62%)
Frame = +2
Query: 74 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 253
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 254 AYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATE 433
+ + GD VC A S ELP+YGIK+GL+NY AAY TG ++ TE
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATGLLVARRFLTQMKLADVF--KTE 121
Query: 434 VTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
+T +EY + + P F+ LDVGLARTTTGA+VF MKG
Sbjct: 122 IT-EEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKG 159
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 136 bits (328), Expect = 4e-31
Identities = 68/156 (43%), Positives = 93/156 (59%)
Frame = +2
Query: 89 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 268
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 269 EGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDE 448
+GD ++ A S EL RYGI G TNY+AAY TG D +Y E+ G
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVYR-PKEIDGTY 122
Query: 449 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
+ +D A R +LD+GLAR+T GARVFGA+KG
Sbjct: 123 SVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKG 158
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 107 bits (257), Expect = 2e-22
Identities = 54/111 (48%), Positives = 67/111 (60%)
Frame = +2
Query: 224 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXX 403
++NK V CQV S + GD + +A S EL YG+KVGLTNYAAAYCTG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 404 XDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
DS + G EV G+ Y+VE +N F+ LDVG+ TTG RVFGA+KG
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKG 114
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 3e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 242 TCQVAYSRIEGD 277
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 85.0 bits (201), Expect = 1e-15
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Frame = +2
Query: 212 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 391
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ G+KVGLTNYAAAYC G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLLLAHRLL 60
Query: 392 XXXXXDSLYTG-ATEVTGDEY---NVEPVDNG---PGAFRCY 496
D +Y G A TG++ EPVD G P + +C+
Sbjct: 61 NRFGMDKIYEGLARTTTGNKVFGALKEPVDCGLSIPHSTKCF 102
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 80.2 bits (189), Expect = 3e-14
Identities = 48/157 (30%), Positives = 75/157 (47%)
Frame = +2
Query: 86 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 265
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 266 IEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGD 445
++GD I+ ++Y L + K NY +Y G +
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKVK-----------QSE 117
Query: 446 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
YN + N +D+GL R T G + F +MKG
Sbjct: 118 TYNKK---NYSSKITAIIDIGLKRATIGNKSFASMKG 151
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 72.9 bits (171), Expect = 5e-12
Identities = 55/151 (36%), Positives = 73/151 (48%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 284 VCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTGDEYNVEP 463
+ AAYS EL YG + + AAY TG + V+
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKA 93
Query: 464 VDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
++ G G LD+GLAR GARVF A+KG
Sbjct: 94 LNAGYG--EAILDIGLARAKPGARVFAALKG 122
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.7 bits (163), Expect = 4e-11
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 284 VCAAYSHEL-PRYGIKVGLTNYAAAYCTG 367
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 59.3 bits (137), Expect(2) = 3e-09
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 284 VCAAYSHELPRYGIKVGLTNYAAAYCTG 367
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 24.2 bits (50), Expect(2) = 3e-09
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 479 GAFRCYLDVGLARTTTGARVFGAMKG 556
G LD+GL T G++VF +G
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEG 122
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.7 bits (138), Expect = 4e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 284 VCAAYSHELPRYGIKVGLTNYAAAYCTG 367
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 54.0 bits (124), Expect(2) = 3e-07
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +2
Query: 107 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 286
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 287 CAAYSHELPRYGIKVGLTNYAAAYCTG 367
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 22.6 bits (46), Expect(2) = 3e-07
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +2
Query: 419 TGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
T A +TG + + ++ G LD+G+ + G +++ +KG
Sbjct: 79 TSAAYLTGYLFGKKALNEGYD--ETILDIGVQPSIKGTKIYAVLKG 122
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 6e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +2
Query: 110 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 205
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
Score = 41.5 bits (93), Expect = 0.013
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +3
Query: 303 MNSHAMVSRWV*LTMLLPTALVCCWQEDCCRGSAWTVSTQVPLKSLVMNIMLNQLTMAQE 482
M MV + ML P AL CCW G AWT S + + + +N M LT++
Sbjct: 97 MKFQNMVXKLAXNIMLQPIALACCWPAGFXIGLAWTRSMKAKWRXMEVNTMWKALTVSLV 156
Query: 483 HSDVTWM 503
S WM
Sbjct: 157 PSLAIWM 163
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 44.0 bits (99), Expect(2) = 9e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 101 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 280
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 281 IVCAAYSHEL-PRYG--IKVGLTNYAAAYCTG 367
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
Score = 31.1 bits (67), Expect(2) = 9e-07
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 479 GAFRCYLDVGLARTTTGARVFGAMKG 556
G LDVGLA T+G RVF A++G
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRG 125
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 48.0 bits (109), Expect = 1e-04
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 235
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 236 DVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 367
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect = 0.007
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 295
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 296 YSHELPRYGIKVGLTNYAAAYCTG 367
L +YG+ + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 37.5 bits (83), Expect = 0.21
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +2
Query: 122 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 301
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 302 HELPRYGIKVGLTNYAAAYCTG 367
L + + + N Y G
Sbjct: 61 KTLKK-ALNIDGNNIQMYYLAG 81
>UniRef50_Q38FY2 Cluster: Protein kinase, putative; n=1; Trypanosoma
brucei|Rep: Protein kinase, putative - Trypanosoma
brucei
Length = 650
Score = 35.9 bits (79), Expect = 0.63
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 436 DFSGTCVETVQAEPLQQSSCQQQTSAVGS-SIVSQTH 329
D+SGT + PL+ + C Q S V + SIVSQTH
Sbjct: 452 DYSGTSASLITISPLRSTECMQSLSNVSTPSIVSQTH 488
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.9 bits (79), Expect = 0.63
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +2
Query: 122 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 301
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 302 HELPRYGIKVGLTNYAAAYCTG 367
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 1.5
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 242 TCQVA 256
C +A
Sbjct: 161 QCSLA 165
>UniRef50_O07653 Cluster: Cellulase B; n=3; Gammaproteobacteria|Rep:
Cellulase B - Cellvibrio mixtus
Length = 622
Score = 33.9 bits (74), Expect = 2.6
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 469 VNWFNIIFITSDFSGTCVETVQAEP-LQQSSCQQQTSAVGSSIVSQTHLDTIAW 311
+NW + D SGT + T+QAE QQS QQ+T+ + ++D W
Sbjct: 477 INWLKVESTGGDNSGTVIATIQAEDHSQQSGTQQETTTDTGGGKNVGYIDAGDW 530
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 33.5 bits (73), Expect = 3.4
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +2
Query: 428 TEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMK 553
+ ++ +Y+VE NG F +L+VGL +T+ G VFG +K
Sbjct: 37 SRLSKSDYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLK 77
>UniRef50_Q7RWY4 Cluster: Putative uncharacterized protein
NCU08779.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08779.1 - Neurospora crassa
Length = 864
Score = 33.5 bits (73), Expect = 3.4
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -2
Query: 555 PFMAPNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
P AP+T AP AKP+S LN PG +TGS SS
Sbjct: 647 PAPAPSTAAPATTSAKPSS---LNIPGVSTTGSIASSS 681
>UniRef50_UPI0000F2BEF5 Cluster: PREDICTED: similar to Rho guanine
nucleotide exchange factor (GEF) 15,; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to Rho guanine
nucleotide exchange factor (GEF) 15, - Monodelphis
domestica
Length = 834
Score = 32.3 bits (70), Expect = 7.8
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -2
Query: 555 PFMAPNTRAPVVVRAKPTSK*HLNA-PGPLSTGSTLY--SSPVTSVAPV*RLSKPSLCNN 385
P P+ + P V+R +P S+ +N+ PG L G + + P TS P+ S LC++
Sbjct: 8 PATPPSQKPPRVIRPQPPSRLRINSPPGSLFNGPSHQEAAKPPTSPDPLVLTSLSPLCDS 67
Query: 384 LLASNR 367
L S +
Sbjct: 68 LPTSTK 73
>UniRef50_Q7R2S3 Cluster: GLP_291_73636_75723; n=2; Giardia
intestinalis|Rep: GLP_291_73636_75723 - Giardia lamblia
ATCC 50803
Length = 695
Score = 32.3 bits (70), Expect = 7.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 253 NLTGNIFIG*PYNQSVLWS--VVFVFILDNEAFASIVVSFSL 134
NL GN+F G P+ L ++ V LDN +FAS++ S +L
Sbjct: 240 NLQGNLFTGDPFTTETLKPNHLLQVLDLDNNSFASVITSSAL 281
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,739,493
Number of Sequences: 1657284
Number of extensions: 11404794
Number of successful extensions: 29072
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29037
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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