Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C04
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208980-1|BAD92217.1|  303|Homo sapiens ribosomal protein L5 va...   280   3e-75
BC132972-1|AAI32973.1|  297|Homo sapiens ribosomal protein L5 pr...   277   1e-74
BC132970-1|AAI32971.1|  297|Homo sapiens ribosomal protein L5 pr...   277   1e-74
BC109370-1|AAI09371.1|  297|Homo sapiens ribosomal protein L5 pr...   277   1e-74
AL162740-1|CAI22505.1|  297|Homo sapiens ribosomal protein L5 pr...   277   1e-74
AK222604-1|BAD96324.1|  297|Homo sapiens ribosomal protein L5 va...   277   1e-74
U14966-1|AAA85654.1|  297|Homo sapiens ribosomal protein L5 prot...   275   6e-74
BC001882-1|AAH01882.1|  101|Homo sapiens RPL5 protein protein.        191   1e-48
AL162740-2|CAI22506.1|  126|Homo sapiens ribosomal protein L5 pr...   174   2e-43
BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein.             30   6.3  
AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein.             30   6.3  
AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein.             30   6.3  
AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein.             30   6.3  
AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein.             30   6.3  
AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein.     30   6.3  

>AB208980-1|BAD92217.1|  303|Homo sapiens ribosomal protein L5
           variant protein.
          Length = 303

 Score =  280 bits (686), Expect = 3e-75
 Identities = 124/169 (73%), Positives = 142/169 (84%)
 Frame = +2

Query: 50  IF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLS 229
           +F +MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++
Sbjct: 4   LFRRMGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVT 63

Query: 230 NKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXD 409
           N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG             D
Sbjct: 64  NRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMD 123

Query: 410 SLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
            +Y G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 124 KIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 172


>BC132972-1|AAI32973.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  277 bits (680), Expect = 1e-74
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
            CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG             D +Y 
Sbjct: 61  ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120

Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
           G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165


>BC132970-1|AAI32971.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  277 bits (680), Expect = 1e-74
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
            CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG             D +Y 
Sbjct: 61  ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120

Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
           G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165


>BC109370-1|AAI09371.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  277 bits (680), Expect = 1e-74
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
            CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG             D +Y 
Sbjct: 61  ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120

Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
           G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165


>AL162740-1|CAI22505.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  277 bits (680), Expect = 1e-74
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
            CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG             D +Y 
Sbjct: 61  ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120

Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
           G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165


>AK222604-1|BAD96324.1|  297|Homo sapiens ribosomal protein L5
           variant protein.
          Length = 297

 Score =  277 bits (680), Expect = 1e-74
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
            CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG             D +Y 
Sbjct: 61  ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120

Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
           G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165


>U14966-1|AAA85654.1|  297|Homo sapiens ribosomal protein L5
           protein.
          Length = 297

 Score =  275 bits (675), Expect = 6e-74
 Identities = 122/165 (73%), Positives = 138/165 (83%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 421
            CQ+AY+RIEGD IVCA Y+HELP+YG+KVGLTNYAAAYCTG             D +Y 
Sbjct: 61  ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120

Query: 422 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
           G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 165


>BC001882-1|AAH01882.1|  101|Homo sapiens RPL5 protein protein.
          Length = 101

 Score =  191 bits (466), Expect = 1e-48
 Identities = 83/98 (84%), Positives = 95/98 (96%)
 Frame = +2

Query: 62  MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
           MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1   MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60

Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAA 355
            CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAA
Sbjct: 61  ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98


>AL162740-2|CAI22506.1|  126|Homo sapiens ribosomal protein L5
           protein.
          Length = 126

 Score =  174 bits (424), Expect = 2e-43
 Identities = 76/115 (66%), Positives = 90/115 (78%)
 Frame = +2

Query: 212 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 391
           +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG        
Sbjct: 1   MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60

Query: 392 XXXXXDSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKG 556
                D +Y G  EVTGDEYNVE +D  PGAF CYLD GLARTTTG +VFGA+KG
Sbjct: 61  NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKG 115


>BC150245-1|AAI50246.1| 1379|Homo sapiens KIAA0774 protein.
          Length = 1379

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 10/34 (29%), Positives = 25/34 (73%)
 Frame = -2

Query: 543 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
           P+ ++ +++ ++ +S   ++ PGP++T ++LYSS
Sbjct: 789 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 822


>AL607144-1|CAI40565.1| 1163|Homo sapiens KIAA0774 protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 10/34 (29%), Positives = 25/34 (73%)
 Frame = -2

Query: 543 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
           P+ ++ +++ ++ +S   ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607


>AL596114-1|CAI39910.1| 1163|Homo sapiens KIAA0774 protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 10/34 (29%), Positives = 25/34 (73%)
 Frame = -2

Query: 543 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
           P+ ++ +++ ++ +S   ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607


>AL596092-1|CAI40386.1| 1163|Homo sapiens KIAA0774 protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 10/34 (29%), Positives = 25/34 (73%)
 Frame = -2

Query: 543 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
           P+ ++ +++ ++ +S   ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607


>AL160255-1|CAI41204.1| 1163|Homo sapiens KIAA0774 protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 10/34 (29%), Positives = 25/34 (73%)
 Frame = -2

Query: 543 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
           P+ ++ +++ ++ +S   ++ PGP++T ++LYSS
Sbjct: 574 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 607


>AB018317-1|BAA34494.2| 1381|Homo sapiens KIAA0774 protein protein.
          Length = 1381

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 10/34 (29%), Positives = 25/34 (73%)
 Frame = -2

Query: 543 PNTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSS 442
           P+ ++ +++ ++ +S   ++ PGP++T ++LYSS
Sbjct: 791 PSAKSRILIASQRSSASAIHPPGPITTATSLYSS 824


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,863,059
Number of Sequences: 237096
Number of extensions: 1828835
Number of successful extensions: 12330
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12330
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)