Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C03
         (426 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IJM1 Cluster: Putative uncharacterized protein; n=1; ...    35   0.81 
UniRef50_Q1VHS0 Cluster: 5-amino-6-(5-phosphoribosylamino)uracil...    34   1.4  
UniRef50_Q183X1 Cluster: GntR-family transcriptional regulator; ...    33   2.5  
UniRef50_P42396 Cluster: UPF0259 membrane protein BUsg_265; n=2;...    32   4.3  
UniRef50_Q8IEH2 Cluster: Putative uncharacterized protein PF13_0...    32   5.7  
UniRef50_A2FM43 Cluster: Putative uncharacterized protein; n=1; ...    31   7.5  
UniRef50_O05962 Cluster: ADP,ATP carrier protein 5; n=14; Ricket...    31   9.9  

>UniRef50_Q8IJM1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1136

 Score = 34.7 bits (76), Expect = 0.81
 Identities = 17/54 (31%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = -1

Query: 345 HLKKYYALHFVINFMKWINFV-IHHKYGTLIIKFKPNKILIWKVLEYLNNLLKI 187
           +L KY++LH + +++  IN   I+ +  + ++ ++  KI++WK L+Y+ N L I
Sbjct: 617 YLWKYFSLHSIADYLYVINERNIYDEQISFLLFYQFVKIIMWKYLQYMENKLCI 670


>UniRef50_Q1VHS0 Cluster: 5-amino-6-(5-phosphoribosylamino)uracil
           reductase; n=1; Psychroflexus torquis ATCC 700755|Rep:
           5-amino-6-(5-phosphoribosylamino)uracil reductase -
           Psychroflexus torquis ATCC 700755
          Length = 222

 Score = 33.9 bits (74), Expect = 1.4
 Identities = 18/73 (24%), Positives = 39/73 (53%)
 Frame = -1

Query: 258 IIKFKPNKILIWKVLEYLNNLLKIR*QMCFI*AHQNNCTAPNIVSAVQSKHNSDEIHISL 79
           +   +P KI+ W   ++++N++K      F+ +  +N  A NI+  +  K N +++++ L
Sbjct: 93  VANMQPQKIVFWGSDKHVDNVIKKYHDYIFLTSFDHN--ANNILPLLNDKFNLNDVYMKL 150

Query: 78  TSNEVLNVGYTYL 40
             N +L  G  +L
Sbjct: 151 GINSLLVEGGNFL 163


>UniRef50_Q183X1 Cluster: GntR-family transcriptional regulator;
           n=1; Clostridium difficile 630|Rep: GntR-family
           transcriptional regulator - Clostridium difficile
           (strain 630)
          Length = 234

 Score = 33.1 bits (72), Expect = 2.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 164 YIKHICYLIFNKLFKYSRTFHISILLGLNFIIK 262
           YI  IC L  +++F+YS T+H    L LN +++
Sbjct: 202 YISQICKLQNSEIFEYSHTYHYGYTLTLNAVVE 234


>UniRef50_P42396 Cluster: UPF0259 membrane protein BUsg_265; n=2;
           Buchnera aphidicola|Rep: UPF0259 membrane protein
           BUsg_265 - Buchnera aphidicola subsp. Schizaphis
           graminum
          Length = 247

 Score = 32.3 bits (70), Expect = 4.3
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 89  CISSLLCLDCTALTILGAVQLFW*AYIKHICYLIFNKLFKYSRTFHISILLGLNFII 259
           CI   + + C  L I+G   LFW   +K I   +F+  +  S+ F I ++L +N  I
Sbjct: 174 CIRLSISISCKHLNIVGTSVLFW-MCVKFILTTVFSNTYIISKNF-IFLILNINMNI 228


>UniRef50_Q8IEH2 Cluster: Putative uncharacterized protein
           PF13_0080; n=4; Plasmodium|Rep: Putative uncharacterized
           protein PF13_0080 - Plasmodium falciparum (isolate 3D7)
          Length = 2518

 Score = 31.9 bits (69), Expect = 5.7
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = -1

Query: 342 LKKYYALHFVINFMK-WINFVIHHKYGTLIIKFKPNKILIWKV 217
           L+K   L +V N+ K +IN VI+ K+G +  KF P K ++ K+
Sbjct: 803 LRKTKILKYVYNYFKEFINNVINTKFGKIYRKFFPRKHILNKI 845


>UniRef50_A2FM43 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 474

 Score = 31.5 bits (68), Expect = 7.5
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 86  ICISSLLCLDCTALTILGAVQLFW*AYIKHICYLIFNKLFKYSRTFHISILLGL 247
           IC S   CL+C    +LGA Q        ++CY   N  FK   +F I++ L L
Sbjct: 425 ICESDKKCLECDQKLVLGAYQ------DANVCYPTKNSQFKRKLSFSITVTLTL 472


>UniRef50_O05962 Cluster: ADP,ATP carrier protein 5; n=14;
           Rickettsieae|Rep: ADP,ATP carrier protein 5 - Rickettsia
           prowazekii
          Length = 500

 Score = 31.1 bits (67), Expect = 9.9
 Identities = 24/82 (29%), Positives = 38/82 (46%)
 Frame = +2

Query: 14  AL*FCLVGYR*V*PTLSTSLDVNEICISSLLCLDCTALTILGAVQLFW*AYIKHICYLIF 193
           AL FC++  + +   L  S+ ++EI  S+ +        +     LF   Y K I +L F
Sbjct: 34  ALMFCILFNQNILRILKDSILISEI--SAEIAGFAKVYCVTPVAALFVIIYAKMINHLTF 91

Query: 194 NKLFKYSRTFHISILLGLNFII 259
            K+F Y   F IS  +   F+I
Sbjct: 92  EKIFYYLSAFFISCFILFAFVI 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,156,516
Number of Sequences: 1657284
Number of extensions: 6203015
Number of successful extensions: 11571
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11568
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)