Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C03
         (426 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-691|AAF45995.3|  840|Drosophila melanogaster CG4041-PA ...    29   3.4  

>AE014298-691|AAF45995.3|  840|Drosophila melanogaster CG4041-PA
           protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +2

Query: 56  TLSTSLDVNEICISSLLCLDCTALTILGAVQLFW*AYIKHICYLIFNKLFKYSRTFHISI 235
           T    L   ++C S+ L L   ++ ILG  Q       +H+C  +     K+ RT  +S 
Sbjct: 16  TFFAKLHPGDVCGSNGLPLTPNSIAILGRAQKLKELQDEHLCQYLDVIRGKHERTIVVSE 75

Query: 236 LLGLN 250
            LGL+
Sbjct: 76  YLGLS 80


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,452,143
Number of Sequences: 53049
Number of extensions: 277861
Number of successful extensions: 431
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)