Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C02
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   2.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   3.0  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   4.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   4.0  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   9.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 407 PSRYSTGLPSYGK--ALAGRAQVRLG 336
           P + + GLP YGK   L+  +  +LG
Sbjct: 253 PQKIALGLPVYGKTFTLSSASNAKLG 278


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 400 DTVRDSHLTAKRWQEEHK 347
           +  R+S  T K W  EHK
Sbjct: 90  NATRESTATLKAWLNEHK 107


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 407 PSRYSTGLPSYGKALA 360
           PS+ + GL SYG+  A
Sbjct: 255 PSKINLGLGSYGRGFA 270


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 407 PSRYSTGLPSYGKALA 360
           PS+ + GL SYG+  A
Sbjct: 255 PSKINLGLGSYGRGFA 270


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 407 PSRYSTGLPSYGKALA 360
           PS+ + GL +YG+  A
Sbjct: 254 PSKINLGLGTYGRGFA 269


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 19  MAEIYSHPASKGCVTASSQSAAANQPVHPDIR*NHS 126
           +AE  + P   G   A++  +AA Q   PD    HS
Sbjct: 110 IAEGVAGPEKGGGAGAAASGSAAAQAGQPDNAIEHS 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,028
Number of Sequences: 336
Number of extensions: 1773
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)