Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C01
         (238 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   0.78 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   1.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          20   3.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   3.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    20   3.1  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    20   4.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    19   7.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    19   7.3  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    19   7.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     19   7.3  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            19   7.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    19   7.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    19   9.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    19   9.6  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 0.78
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 162 TPCATPFREPTSAQ 121
           TPCA+P R+P   Q
Sbjct: 131 TPCASPNRKPDDNQ 144


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 150  WHK-ECFKCGDCLKRLDSTNCCEGPDK 227
            W K E F C   L   ++ N C+ P+K
Sbjct: 1299 WGKYEVFNCAPGLHWDNNKNICDWPEK 1325


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 50  WSPVLSPKRHRVRAATLWRLCLRC*ADVGSRKGVAQGV 163
           WSP+ +PK++ +     W+  L      G+ +G   G+
Sbjct: 431 WSPLTNPKQY-MEIFARWKDILEKPRQRGTLEGNNMGI 467


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 133 WLAEGGGTRSVSNAATA*NGLTQPTVA 213
           WL   GG   ++N +T  + LT    A
Sbjct: 198 WLDMSGGMHQMANYSTDYSSLTHSLAA 224


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.2 bits (40), Expect = 3.1
 Identities = 9/40 (22%), Positives = 16/40 (40%)
 Frame = +1

Query: 46  CLEPRVIAKAPPGEGCHAVAAMFTLLSRCWLAEGGGTRSV 165
           CL   V  +  P EGC+ +  +   +       G G+  +
Sbjct: 82  CLTLNVYTRDLPKEGCNFLKPVMVWIHGGGFTSGSGSSEI 121


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 4.2
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +3

Query: 159 ECFKCGD 179
           +C+KCGD
Sbjct: 126 KCYKCGD 132


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = -3

Query: 95  WQPSPGGALAITR 57
           W+ S GG+  +T+
Sbjct: 155 WESSAGGSFTVTQ 167


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 166 KHSLCHPLPRANI 128
           KH LC+  P  N+
Sbjct: 152 KHPLCNDDPNGNV 164


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 153 HKECFKCGDCLK 188
           H EC KC +  K
Sbjct: 72  HTECSKCSETQK 83


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 187 FKQSPHLKHSLCHPLP 140
           +  SPHL H     LP
Sbjct: 105 YNHSPHLSHMQFMQLP 120


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 94 GSPHPVAL 71
          G+PHP AL
Sbjct: 43 GAPHPAAL 50


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 477

 Score = 19.0 bits (37), Expect = 7.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 94 GSPHPVAL 71
          G+PHP AL
Sbjct: 43 GAPHPAAL 50


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 161 LLVPPPSASQHLLSSVNIAATAWQPSP 81
           LLVP P  +    SS +  + +  P P
Sbjct: 198 LLVPIPQRTASTASSASNYSPSQSPEP 224


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 18.6 bits (36), Expect = 9.6
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -1

Query: 229 SLSGPSQQLVESSRFKQSPHLKH 161
           SL GP QQ+        SP   H
Sbjct: 97  SLHGPQQQMDGQEYRPDSPSSMH 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,571
Number of Sequences: 336
Number of extensions: 1152
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3428128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)