Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C01
(238 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 39 5e-04
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 33 0.024
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 33 0.032
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 32 0.056
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 32 0.075
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 31 0.099
01_01_0683 + 5250888-5251095,5252015-5252124 29 0.70
01_05_0726 - 24630080-24630778,24630899-24631011,24631088-246311... 28 0.92
12_01_0900 - 8724339-8724380,8725263-8725376,8726491-8726559,872... 28 1.2
06_01_1066 - 8656108-8657622 28 1.2
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 27 1.6
07_03_0997 - 23203166-23203330,23203627-23203693,23203771-232038... 27 2.1
03_01_0545 - 4086692-4087591 27 2.1
09_06_0129 - 21028528-21028575,21029559-21029654,21029989-210300... 27 2.8
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 27 2.8
05_04_0145 - 18391112-18392461,18392545-18392637 27 2.8
12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 26 4.9
06_01_0669 + 4894298-4894456 26 4.9
04_04_0248 - 23891684-23892064 26 4.9
12_01_0999 - 10128057-10128143,10128346-10128516,10128602-101286... 25 6.5
09_04_0581 - 18684273-18685814,18686156-18686200,18686393-18686683 25 6.5
05_04_0007 + 17092818-17093867 25 6.5
04_03_0501 + 16593710-16593886,16595255-16595311,16595748-165974... 25 6.5
03_06_0027 + 31131621-31131676,31131681-31132350,31133152-311333... 25 6.5
03_05_0360 - 23444865-23445351,23445798-23445835 25 6.5
02_05_0337 - 28060009-28060716,28061055-28061498,28061732-280617... 25 6.5
02_04_0293 + 21644415-21644533,21644686-21645118 25 6.5
01_06_0300 + 28312590-28313939 25 6.5
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 25 8.6
09_06_0198 - 21496692-21496991,21497111-21497258,21497341-214975... 25 8.6
03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657 25 8.6
03_05_0165 + 21435948-21436144,21436234-21436318,21436690-214367... 25 8.6
02_03_0292 - 17358129-17358213,17358462-17358541,17358627-173587... 25 8.6
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 39.1 bits (87), Expect = 5e-04
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTN 206
CG VY E++ A GR +H+ CF+C C L +N
Sbjct: 16 CGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSN 51
Score = 29.9 bits (64), Expect = 0.30
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKC--GDC 182
C VY E++ G +HK CF+C G C
Sbjct: 115 CNKTVYPLEKVNLNGSSYHKSCFRCTHGGC 144
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 33.5 bits (73), Expect = 0.024
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +3
Query: 60 CYRQSATG*GLPRCGGYVYAAEQMLARGRGWHKECFKC--GDCLKRLDSTNCCEG 218
C S T C VY E++ G +HK CFKC G C+ S G
Sbjct: 95 CSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNG 149
Score = 29.1 bits (62), Expect = 0.53
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDC 182
C V+ + + A G +HK CFKC C
Sbjct: 13 CDKTVHFIDLLTADGVPYHKTCFKCSHC 40
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 33.1 bits (72), Expect = 0.032
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKC--GDCLKRLDSTNCCEG 218
C VY E++ G +HK CFKC G C+ S G
Sbjct: 109 CQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNG 150
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTN 206
C V+ + + A G +HK CFKC C L N
Sbjct: 13 CDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCN 48
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 32.3 bits (70), Expect = 0.056
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTN 206
C VY +++ A R +HK CF+C C L N
Sbjct: 15 CDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLAN 50
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKC--GDC 182
C VY E++ +HK CFKC G C
Sbjct: 113 CNKTVYPIERVTVNNTMYHKSCFKCCHGGC 142
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 31.9 bits (69), Expect = 0.075
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKC--GDCL 185
C VY E+M G +H+ CFKC G CL
Sbjct: 107 CKKTVYPLEKMTMEGECYHRTCFKCAHGGCL 137
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDC 182
C V+ + + A +HK CF+C C
Sbjct: 13 CDKTVHFIDLLTADSIPYHKSCFRCSHC 40
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 31.5 bits (68), Expect = 0.099
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKC--GDC 182
C Y E++ G+ +HK CFKC G C
Sbjct: 111 CSKTAYPLEKVTVEGQAYHKSCFKCSHGGC 140
Score = 30.7 bits (66), Expect = 0.17
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTN 206
C VY +Q+ G +H+ CFKC C L N
Sbjct: 12 CTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGN 47
>01_01_0683 + 5250888-5251095,5252015-5252124
Length = 105
Score = 28.7 bits (61), Expect = 0.70
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 11 IRHEADVRTTELVWSPVLSPKRHRVRAATLWRLCLRC*ADVGSRKGVAQGV 163
+RH+A RT VW+PV RVR A R + C D + GV +GV
Sbjct: 18 LRHKA--RTAVGVWAPVA-----RVRRAVGVRAVVECGEDAAAAGGVEEGV 61
>01_05_0726 -
24630080-24630778,24630899-24631011,24631088-24631169,
24631248-24631337,24631412-24631469,24631661-24631756,
24631835-24631908,24632006-24632068,24634111-24634320,
24634869-24635048
Length = 554
Score = 28.3 bits (60), Expect = 0.92
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -3
Query: 182 AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLPRAEF 9
AV T L PP + S SS + T PS G L ++G Q P V P A+F
Sbjct: 366 AVVPPGTTLTPPGAPSHPYTSSEPLPQTPAVPSGGAPLYTSQGILQGPPGV--PPAQF 421
>12_01_0900 -
8724339-8724380,8725263-8725376,8726491-8726559,
8726665-8726824,8726905-8726961,8728080-8728258,
8728332-8728442,8728512-8728535,8729993-8730107,
8730665-8730720,8731595-8731807
Length = 379
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWH 155
CGG V+ EQML G WH
Sbjct: 299 CGG-VFIQEQMLVNGHAWH 316
>06_01_1066 - 8656108-8657622
Length = 504
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 164 TLLVPPPSASQHLLSSVNIAATA 96
T+ PPP AS+HL S+ +AA A
Sbjct: 2 TMSSPPPRASKHLKSAYRLAAIA 24
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +3
Query: 54 APCYRQSATG*GLPRCGGYVYA---AEQMLARGRGWHKECFKCGDC 182
AP Q+ + G CGG + + G WH +CF+C C
Sbjct: 100 APSQTQARSR-GYRVCGGCKHEIGHGHYLSCLGMYWHPQCFRCSSC 144
>07_03_0997 -
23203166-23203330,23203627-23203693,23203771-23203862,
23204820-23204956,23205050-23205116,23205212-23205278,
23205356-23205441,23206061-23206153,23206337-23206522,
23207316-23207372,23207455-23207582,23207662-23207731,
23207815-23207950,23208378-23208529,23208606-23208680,
23208765-23208929,23209063-23209128,23209229-23209333,
23209929-23210132,23210462-23211715
Length = 1123
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 176 AAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRL 24
AA LL P+A LLS++ ++ A + + A RGS PL++RL
Sbjct: 8 AAAAALLGGDPAAFDALLSTLMSSSNADRAAAEAAFHRLRGSHPEPLALRL 58
>03_01_0545 - 4086692-4087591
Length = 299
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2
Query: 11 IRHEADVRTTELVWSPVLSPKRHRVRAATLWRLCLR 118
+R E V +TE SP SP+RHR RAA+ RL LR
Sbjct: 223 LRREISV-STEAPSSPEPSPQRHRHRAASP-RLRLR 256
>09_06_0129 -
21028528-21028575,21029559-21029654,21029989-21030070,
21030394-21030472,21030946-21031042,21031506-21031593,
21033326-21033687
Length = 283
Score = 26.6 bits (56), Expect = 2.8
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = -3
Query: 215 FATVG*VKPF*AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPL 36
F +G + P VA E P PSA+ + S GGALA+ +A L
Sbjct: 47 FRRIG-ISPSGGVAGDEAAETPTPSAAVPEEAPPRNRTRELVASSGGALALALMCNKALL 105
Query: 35 SVRLP 21
VR+P
Sbjct: 106 PVRVP 110
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 26.6 bits (56), Expect = 2.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 141 GRGWHKECFKCGDC 182
G WH ECF+C C
Sbjct: 575 GAVWHPECFRCHAC 588
>05_04_0145 - 18391112-18392461,18392545-18392637
Length = 480
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPGG-ALAI 63
PPPS S L S+ +ATA QP P G A+A+
Sbjct: 436 PPPSQSSDLPSNPTSSATA-QPKPRGVAVAV 465
>12_01_0314 -
2395113-2395760,2396151-2396738,2397218-2397252,
2397546-2397632,2397913-2397985,2398648-2398714,
2398795-2398931,2400196-2400217,2400733-2400807,
2402281-2402365,2402605-2403334
Length = 848
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 125 LSSVNIAATAWQPSPGG-ALAITRGSKQAPLSVRLPRAEFCS 3
+ VN+AA+A P+PGG A+A + RL R C+
Sbjct: 86 VDEVNLAASAADPAPGGLAVATVVATSSQRQRRRLLRRAVCA 127
>06_01_0669 + 4894298-4894456
Length = 52
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 37 NGACLEPRVIAKAPPGEGCHAVAAMFTLLSRCWLAEGGGTR 159
+GA L PR + + PP A AA + R +G G R
Sbjct: 4 DGAALNPRWLGREPPQSAAAAAAADWDAEKRRQREKGDGGR 44
>04_04_0248 - 23891684-23892064
Length = 126
Score = 25.8 bits (54), Expect = 4.9
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = -3
Query: 176 AAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPL 36
AA T + P +A+ LL S AA W P+ A + APL
Sbjct: 59 AAAATRMRPAAAAAMPLLPSAATAARMWPPAAKAAPMHPAAATAAPL 105
>12_01_0999 -
10128057-10128143,10128346-10128516,10128602-10128677,
10128787-10128917,10129007-10129111,10129215-10129391,
10129475-10129623,10129715-10129826,10131819-10132070,
10132323-10132444,10132537-10133371,10133386-10133489,
10133582-10133647,10133766-10133888,10133975-10134151,
10134217-10134387,10134478-10134957,10135357-10135369
Length = 1116
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 165 NTPCATPFREPTSAQQRK 112
NTPC+ R+PT+A K
Sbjct: 63 NTPCSATLRQPTTASLSK 80
>09_04_0581 - 18684273-18685814,18686156-18686200,18686393-18686683
Length = 625
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 179 VAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLPRAEFC 6
+A T P S+S S+ +I A+ P P A+ G Q RL +FC
Sbjct: 358 LATSSTSNAQPSSSSMSRRSTRSIGASQELPGPVSHEAMVEGFLQIASEARLSVKQFC 415
>05_04_0007 + 17092818-17093867
Length = 349
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 164 TLLVPPPSASQHLLSSVNIAATAWQPSPGGALA--ITRGSKQAPLSVRL 24
TLL + Q L + A+++W GG LA I G+K LS+ L
Sbjct: 143 TLLSAILTNQQTCLDGLQAASSSWSERGGGGLAAPIANGTKLYSLSLSL 191
>04_03_0501 +
16593710-16593886,16595255-16595311,16595748-16597469,
16599045-16599326,16599521-16599637,16599655-16600365
Length = 1021
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 182 AVAAFETLLVPPPSASQHLLSSVNIAATAWQPS 84
AV L++PPP S H L + A PS
Sbjct: 307 AVTKRSKLMLPPPQISDHELEEIAKMGNAGDPS 339
>03_06_0027 +
31131621-31131676,31131681-31132350,31133152-31133319,
31134771-31134986,31135593-31135909,31136058-31136169,
31136256-31136492,31136582-31137172
Length = 788
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +2
Query: 17 HEADVRTTELVWSPVLSPKRHRVRAATLWRLCLR 118
H A V+ PVL P+ RV+ W L R
Sbjct: 109 HHAAAAAARWVFGPVLDPRSKRVQRWNRWILLAR 142
>03_05_0360 - 23444865-23445351,23445798-23445835
Length = 174
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 176 AAFETLLVPPPSASQHLLSSVNIAATAWQPSPGG 75
AA + P+A+ SS N+AA A +PS GG
Sbjct: 127 AAAAAATITDPAAAAARPSSNNVAAPAPRPSTGG 160
>02_05_0337 -
28060009-28060716,28061055-28061498,28061732-28061793,
28061896-28062007,28062144-28062263
Length = 481
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 132 TSAQQRKHSRHSVAALTRWRFGDNTGLQTSSVVRTSASCRILQP 1
T+ Q R H++ + + R G NTG +S +A+ +I P
Sbjct: 84 TAVQIRSHAQKFFSKVVRESSGSNTGSGGASAAAAAAAIQIPPP 127
>02_04_0293 + 21644415-21644533,21644686-21645118
Length = 183
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 147 GWHKECFKCGDCLKRLDSTNCCE 215
G +E F+CG C RL C E
Sbjct: 22 GLPRELFRCGHCHHRLQHRYCSE 44
>01_06_0300 + 28312590-28313939
Length = 449
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +1
Query: 67 AKAPPGEGCHAVAAMFTLLSRCWLAEGGG 153
A PPG CH A+ W + GG
Sbjct: 316 AGKPPGRPCHDATALANTTVAVWTLDQGG 344
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 25.0 bits (52), Expect = 8.6
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 150 WHKECFKCGDCLK 188
WH +CF+C C K
Sbjct: 277 WHPQCFRCFACNK 289
>09_06_0198 - 21496692-21496991,21497111-21497258,21497341-21497578,
21497679-21497889,21497977-21498170,21498263-21498364,
21498525-21499879,21501193-21501494,21501600-21501750,
21501838-21502102,21502155-21502362,21502467-21502660,
21502749-21502850,21503481-21503680,21504010-21504846,
21505806-21506107,21506209-21506359,21506447-21506684,
21506764-21506971,21507078-21507271,21507322-21507462,
21513484-21514811,21515923-21516227,21516331-21516481,
21516570-21516807,21516881-21517088,21517197-21517366,
21517451-21517549,21517708-21519029,21521601-21521683
Length = 3314
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -3
Query: 161 LLVPPPSASQ-HLLSSVNIAATAWQPSPGGALAIT 60
LL+PPP AS L++ ++ A S GGA A++
Sbjct: 1747 LLLPPPCASDDRLVTGKPLSPGATLVSDGGAFALS 1781
>03_05_0924 + 28861561-28861692,28861970-28862262,28862841-28863657
Length = 413
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 116 VNIAATAWQPSPGGALAITRGSKQAPLSVRLPRAEFCS 3
V + A +W PS +L S APL + P +F S
Sbjct: 58 VVVRAASWSPSGPESLPPPPSSSIAPLQMESPVGQFLS 95
>03_05_0165 +
21435948-21436144,21436234-21436318,21436690-21436768,
21436892-21437005,21437249-21437361,21437570-21437677,
21437760-21437879
Length = 271
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 149 PPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLPR 18
PPSA + L+ N AAT P+ +A G Q + PR
Sbjct: 91 PPSAGEGLILFYNPAATKMTPNAQFGIAFNGGFNQPIMCGGEPR 134
>02_03_0292 -
17358129-17358213,17358462-17358541,17358627-17358797,
17359440-17359541,17360216-17360365,17360549-17360671,
17360781-17360867,17361209-17361289,17362071-17362210,
17363490-17363534,17365315-17365485,17365784-17365805
Length = 418
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 91 CHAVAAMFTLLSRCWLAEGGGTRSVSNA 174
C A +F+ S CWL G G ++ +A
Sbjct: 312 CPHDATLFSNRSLCWLKMGAGVNALQDA 339
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,235,989
Number of Sequences: 37544
Number of extensions: 186541
Number of successful extensions: 713
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 57
effective length of database: 12,653,340
effective search space used: 265720140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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