Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C01
(238 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 55 8e-09
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 54 1e-08
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 54 2e-08
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 42 6e-05
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 39 5e-04
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.002
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.016
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.027
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 31 0.11
SB_36610| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.34
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.34
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 29 0.44
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.59
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 29 0.59
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 29 0.78
SB_10458| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2.5) 29 0.78
SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07) 27 1.8
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_24238| Best HMM Match : RecR (HMM E-Value=3.7) 27 2.4
SB_18513| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_14100| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-26) 27 2.4
SB_24315| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_46402| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 26 5.5
SB_47624| Best HMM Match : Caudal_act (HMM E-Value=0.66) 26 5.5
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 26 5.5
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_12718| Best HMM Match : rve (HMM E-Value=0.0031) 26 5.5
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 25 7.2
SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13) 25 7.2
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 25 7.2
SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_8656| Best HMM Match : Chorion_3 (HMM E-Value=2.4) 25 7.2
SB_51805| Best HMM Match : DUF755 (HMM E-Value=6.8) 25 7.2
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 25 7.2
SB_8784| Best HMM Match : Chorion_3 (HMM E-Value=0.37) 25 7.2
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 25 7.2
SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84) 25 9.6
SB_55158| Best HMM Match : DPRP (HMM E-Value=0.66) 25 9.6
SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33) 25 9.6
SB_46422| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_39905| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26) 25 9.6
SB_23494| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_57249| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.6
SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4) 25 9.6
SB_44108| Best HMM Match : Chorion_3 (HMM E-Value=0.81) 25 9.6
SB_1137| Best HMM Match : CC (HMM E-Value=2) 25 9.6
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 55.2 bits (127), Expect = 8e-09
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Frame = +3
Query: 96 RCGGYVYAAEQMLARGRGWHKECFKCGD--CLKRLDSTNCCEG---PDK 227
RC Y AE + G+ WHK CF C + C K+L+STNCCEG PDK
Sbjct: 299 RCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNGIPDK 347
Score = 53.6 bits (123), Expect = 2e-08
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +3
Query: 93 PRCGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTNCCEGPDK 227
PRCG VY AE++ +HK+CF C DC K+LDSTN K
Sbjct: 45 PRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGK 89
Score = 53.6 bits (123), Expect = 2e-08
Identities = 22/37 (59%), Positives = 24/37 (64%)
Frame = +3
Query: 93 PRCGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDST 203
PRC YAAEQ+L G WHK CF C C K+LDST
Sbjct: 219 PRCEKRAYAAEQVLGAGFNWHKSCFNCYKCHKKLDST 255
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 54.4 bits (125), Expect = 1e-08
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +3
Query: 93 PRCGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTNCCEGPDKDIY 236
PRC VY AE+ LA G+ WHK C C C K LDSTN + D +IY
Sbjct: 11 PRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLAD-KDGEIY 57
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 54.0 bits (124), Expect = 2e-08
Identities = 23/38 (60%), Positives = 24/38 (63%)
Frame = +3
Query: 93 PRCGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTN 206
PRC VY AEQ A G+ WHK C C C KRLDSTN
Sbjct: 6 PRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTN 43
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 42.3 bits (95), Expect = 6e-05
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 93 PRCGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTNCCE 215
P+C VY+AE G +HK CF C C K LDST +
Sbjct: 13 PKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 39.1 bits (87), Expect = 5e-04
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTNCCEGPD 224
CG + ++A + WH +C KC DC RLD+ C D
Sbjct: 251 CGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKD 292
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 37.1 bits (82), Expect = 0.002
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 150 WHKECFKCGDCLKRLDSTN 206
+HK+CF C DC K+LDSTN
Sbjct: 6 FHKKCFSCKDCRKKLDSTN 24
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 34.3 bits (75), Expect = 0.016
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDC 182
CG VY E+++A R +H+ CF+C C
Sbjct: 614 CGERVYLMERLVAERRLFHRACFRCSRC 641
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 33.5 bits (73), Expect = 0.027
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTNCCEGPDKD 230
CG V E++ +HK CF C C L+ N C PD D
Sbjct: 248 CGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHD 291
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 141 GRGWHKECFKCGDCLKRLDSTNCCEGPDKDIY 236
GR WH +C KC C L C D IY
Sbjct: 119 GRAWHTKCLKCCLCSDELGREATCYTKDGKIY 150
>SB_36610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 29.9 bits (64), Expect = 0.34
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 135 ARGRGWHKECFKCGDCLKRLDSTNCCEGPDK 227
+RG+ W E ++CG KRL +C + DK
Sbjct: 27 SRGQTWRNELYRCGGRSKRLRLYDCKKKKDK 57
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 29.9 bits (64), Expect = 0.34
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDC 182
CG + ++ +LA + WH CF C C
Sbjct: 92 CGEAIKGSQALLALEKQWHLWCFSCTKC 119
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 29.5 bits (63), Expect = 0.44
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 129 MLARGRGWHKECFKCGDCLKRL 194
M AR +H ECF C C KRL
Sbjct: 95 MRARNNAYHIECFGCQRCRKRL 116
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 135 ARGRGWHKECFKCGDCLKRL 194
A G WH+ C KC C RL
Sbjct: 32 ALGSYWHEGCLKCECCDSRL 51
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 29.1 bits (62), Expect = 0.59
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 99 CGGYVYA-AEQMLARGRGWHKECFKCGDC 182
CG + + A ++ G WH+ CF+C +C
Sbjct: 405 CGQMIDSGASRLEYSGNFWHENCFRCANC 433
Score = 28.7 bits (61), Expect = 0.78
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 129 MLARGRGWHKECFKCGDCLKRLDS 200
+L G WHK CF C C + L S
Sbjct: 475 VLYNGETWHKACFSCYFCHRSLAS 498
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 102 GGYVYAAEQMLARGRGWHKECFKCGDCLKRLDS 200
GG Y E+ +HKECF C C + L S
Sbjct: 531 GGEYYTLEES-----NFHKECFMCSRCGRSLAS 558
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 144 RGWHKECFKCGDCLKRLDS 200
R WH +CF C C + L S
Sbjct: 359 RHWHDKCFICDICRRPLKS 377
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 29.1 bits (62), Expect = 0.59
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGDCLKRLDSTNCCEGPD 224
CG E A G+ +H CF+C C +RL + G +
Sbjct: 14 CGEPCIKTEYKYAIGKRFHNACFRCVVCEERLSTDFYARGSE 55
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 28.7 bits (61), Expect = 0.78
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 129 MLARGRGWHKECFKCGDCLKRLDS 200
+L G WHK CF C C + L S
Sbjct: 63 VLYNGETWHKACFSCYFCHRSLAS 86
Score = 27.9 bits (59), Expect = 1.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 141 GRGWHKECFKCGDC 182
G WH+ CF+C +C
Sbjct: 8 GNFWHENCFRCANC 21
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 102 GGYVYAAEQMLARGRGWHKECFKCGDCLKRLDS 200
GG Y E+ +HKECF C C + L S
Sbjct: 119 GGEYYTLEES-----NFHKECFMCSRCGRSLAS 146
>SB_10458| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2.5)
Length = 501
Score = 28.7 bits (61), Expect = 0.78
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPGG 75
P PS+ H S+ A TA P PGG
Sbjct: 443 PAPSSRMHAAHSMTAAGTASAPGPGG 468
>SB_5869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = -2
Query: 210 NSWLSQAVLSSRRI*NTPCATPFREPTSAQQRKHSRH----SVAALTRWRFGDNTGL 52
+SWL+ + S + N P T FRE + ++RK+++ + T FG N G+
Sbjct: 744 SSWLNATPIESNQ--NKPTETIFREQENEKKRKYNQRIINVEMGTFTPLVFGTNGGM 798
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 27.5 bits (58), Expect = 1.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 150 WHKECFKCGDC 182
WHK CFKC C
Sbjct: 213 WHKGCFKCESC 223
>SB_55889| Best HMM Match : REJ (HMM E-Value=5.4e-07)
Length = 2008
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -3
Query: 143 SASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLPRAEFCS 3
+A+ SSV + A W P GA +T KQ ++V + C+
Sbjct: 1173 AATAEAFSSVELTAFGWIPEDDGAKPLTYTFKQGKITVYSGTSASCT 1219
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRG-WHKECFKCGDCLKRL 194
C Y+ + + R G +H +CF C C K L
Sbjct: 64 CRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPL 96
>SB_24238| Best HMM Match : RecR (HMM E-Value=3.7)
Length = 153
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 16 ARGRRTDNGACLEPRVIAKAPPGEGCHAVAAMFTL 120
+R R DNG CL + A G A A+FTL
Sbjct: 72 SRARAVDNGLCLPTTASSSAAVPAGTGARPAIFTL 106
>SB_18513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4634
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -3
Query: 170 FETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLPRAEF 9
F +P PS L+ +V +A+ + G IT+G+ + + R EF
Sbjct: 3968 FSLQAIPVPSPDSKLIYAVELASATTSSAVAGGANITQGNGKTAIIEYSGRVEF 4021
>SB_14100| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-26)
Length = 350
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 79 PGEGCHAVAAMFTLLSRCWLAEGG 150
P G H +L S CW+ EGG
Sbjct: 114 PSYGSHCTGCRHSLSSFCWMFEGG 137
>SB_24315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 26.2 bits (55), Expect = 4.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 114 YAAEQMLARGRGWHKEC 164
Y AEQ+L WH++C
Sbjct: 59 YTAEQLLTEHASWHRKC 75
>SB_46402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 947
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPG 78
P PS+ H S+ A TA P PG
Sbjct: 413 PAPSSRMHAAHSMTAAGTASAPGPG 437
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 31 TDNGACLEPRVIAKAPPGEGC 93
+D G C + + A+ P GEGC
Sbjct: 1088 SDFGCCWDKKTRARGPGGEGC 1108
>SB_47624| Best HMM Match : Caudal_act (HMM E-Value=0.66)
Length = 424
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 158 LVPPPSASQHLLSSVNIAATAWQPS 84
L PP S SQ S+ N AT W P+
Sbjct: 331 LGPPTSTSQTQPSTSNSTATTWPPA 355
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 69 QSATG*GLPRCGGYVYAAEQML 134
QSAT G+P GG+V E+ML
Sbjct: 580 QSATPTGMPSHGGFVLPDEEML 601
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPG 78
P PS H S+ A TA P PG
Sbjct: 455 PAPSPRMHAAHSMTAAGTAGAPGPG 479
>SB_12718| Best HMM Match : rve (HMM E-Value=0.0031)
Length = 1667
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 155 VPPPSASQHLLSSVNIAATAWQPSPG 78
VP PS H + ++ A TA P PG
Sbjct: 333 VPAPSPRMHAVHNMAAAGTASAPGPG 358
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +3
Query: 141 GRGWHKECFKC-GDCLKRLDSTNCCEGP 221
G W + +K G C KR NCC P
Sbjct: 296 GGPWANQVYKLHGSCRKRTTKGNCCVFP 323
>SB_34676| Best HMM Match : Peptidase_A17 (HMM E-Value=2.4e-13)
Length = 1012
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 194 KPF*AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLP 21
KPF A E L P H+ + +NIA A + + G + + P +RLP
Sbjct: 770 KPFVANRVAEILTESDPIQWHHVRTEMNIADVATRGASAGDIQADTTWIEGPEFLRLP 827
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 148 PLPRANICSAA*T*PPQRGSPHPVALWR 65
P RAN+ + A G+PHPV W+
Sbjct: 288 PKSRANVSTKAWLPCVASGNPHPVVTWQ 315
>SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 155 VPPPSASQHLLSSVNIAATAWQPSP 81
+PPP+ H+LSS ++A Q SP
Sbjct: 156 MPPPTHISHILSSSSLAHLKVQNSP 180
>SB_8656| Best HMM Match : Chorion_3 (HMM E-Value=2.4)
Length = 352
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPG 78
P PS H S+ A TA P PG
Sbjct: 303 PAPSPRMHAAHSMTAAGTASAPGPG 327
>SB_51805| Best HMM Match : DUF755 (HMM E-Value=6.8)
Length = 369
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 99 CGGYVYAAEQMLARGRGWHKECFKCGD-CLKRLDSTNC 209
C GY+ E + + H F+C D L+RL+ C
Sbjct: 168 CSGYIKQVEDFIQGIQRRHLSMFECTDLVLERLEPVAC 205
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 135 ARGRGWHKECFKCGDCLKRLDSTNCCEGPDK 227
A R +H E F C CLK+L+ E DK
Sbjct: 39 AMHRKFHPEHFVCAFCLKQLNKGTFKEQNDK 69
>SB_8784| Best HMM Match : Chorion_3 (HMM E-Value=0.37)
Length = 534
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPG 78
P PS H S+ A TA P PG
Sbjct: 485 PAPSPRMHAAHSMTAAGTASAPGPG 509
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 25.4 bits (53), Expect = 7.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 150 WHKECFKCGDC 182
WH +C +C DC
Sbjct: 25 WHAQCVQCSDC 35
>SB_55198| Best HMM Match : NUDE_C (HMM E-Value=0.84)
Length = 649
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -2
Query: 213 RNSWLSQAVLSSRRI*NTPCATPFREPTSAQQRKHSRHSVAALTRWRFGDNTG 55
+N W S+ LSSR+ +T P ++ S + R S + + NTG
Sbjct: 588 KNKWRSETDLSSRKNSSTASNPPVKKKMSTRSMGLKRASSVKYVQLLYLFNTG 640
>SB_55158| Best HMM Match : DPRP (HMM E-Value=0.66)
Length = 208
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 194 KPF*AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLP 21
KPF A E L P H+ + +NIA A + + G + + P +RLP
Sbjct: 25 KPFVANRVAEILTESDPIQWHHVRTEMNIADVATRGASAGDIQAHTTWIEGPEFLRLP 82
>SB_51745| Best HMM Match : DPRP (HMM E-Value=0.33)
Length = 352
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 194 KPF*AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLP 21
KPF A E L P H+ + +NIA A + + G + + P +RLP
Sbjct: 45 KPFVANRVAEILTESDPIQWHHVRTEMNIADVATRGASAGDIQAHTTWIEGPEFLRLP 102
>SB_46422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 150 WHKECFKCGDCLKRLDSTNCCEGPDK 227
WH K G CLKR C PD+
Sbjct: 328 WHMPVVKGGGCLKR-QFNKTCHPPDE 352
>SB_39905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 123 EQMLARGRGWHKECFKCGDCLKRLDSTN 206
E +A+ G FKCG C KR + N
Sbjct: 201 EAQMAKNAGTKTNLFKCGRCGKRETTYN 228
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 135 ARGRGWHKECFKCGDCLK 188
A G+ WH E F C C K
Sbjct: 95 ALGKAWHVEHFVCAKCEK 112
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 153 HKECFKCGDCLKRLDSTNCCE 215
HK+ +KC DC KR S + E
Sbjct: 358 HKKNYKCDDCNKRYFSYDALE 378
>SB_30073| Best HMM Match : RVT_1 (HMM E-Value=3e-26)
Length = 416
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 143 SASQHLLSSVNIAATAWQPSPG 78
S S SV++AA WQ SPG
Sbjct: 15 SQSHKSCRSVSLAAVPWQQSPG 36
>SB_23494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1013
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQ 90
PPP +H+ S + I TAW+
Sbjct: 243 PPPVEHKHIGSPIAIGETAWR 263
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 194 KPF*AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLP 21
KPF A E L P H+ + +NIA A + + G + + P +RLP
Sbjct: 1229 KPFVANRVAEILTESDPIQWHHVRTEMNIADVATRGASAGDIQAHTTWIEGPEFLRLP 1286
>SB_57249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 25.0 bits (52), Expect = 9.6
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = -3
Query: 155 VPPPSASQHLLSSVNIAATAWQPSPGGALAI 63
+P PS +++L ++V + W PG ++
Sbjct: 259 LPSPSFTRNLTTTVTFQKSVWNQPPGAVFSL 289
>SB_51743| Best HMM Match : DPRP (HMM E-Value=0.4)
Length = 281
Score = 25.0 bits (52), Expect = 9.6
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3
Query: 194 KPF*AVAAFETLLVPPPSASQHLLSSVNIAATAWQPSPGGALAITRGSKQAPLSVRLP 21
KPF A E L P H+ + +NIA A + + G + + P +RLP
Sbjct: 58 KPFVANRVAEILTESDPIQWHHVRTEMNIADVATRGASAGDIQAHTTWIEGPEFLRLP 115
>SB_44108| Best HMM Match : Chorion_3 (HMM E-Value=0.81)
Length = 402
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 152 PPPSASQHLLSSVNIAATAWQPSPG 78
P PS H S+ A TA P PG
Sbjct: 353 PAPSPRMHPAHSMTAAGTAGAPGPG 377
>SB_1137| Best HMM Match : CC (HMM E-Value=2)
Length = 410
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 13 SARGRRTDNGACLEPRVIAKAPPGEGC 93
S+ R + G C++ R +A P G GC
Sbjct: 68 SSAKRGANFGRCIDGRTLADGPNGIGC 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,912,156
Number of Sequences: 59808
Number of extensions: 176532
Number of successful extensions: 573
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 16,821,457
effective HSP length: 56
effective length of database: 13,472,209
effective search space used: 296388598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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