Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_B21
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 34 0.072
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 33 0.17
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 31 0.51
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 31 0.51
02_01_0642 - 4803464-4805665,4806231-4806320 31 0.68
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 30 1.6
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 29 2.1
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268... 29 2.7
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 28 4.8
08_01_0610 - 5367271-5367312,5367737-5367805,5368208-5368360,536... 28 6.3
03_06_0241 - 32587492-32587581,32587673-32587750,32588502-32589422 28 6.3
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 28 6.3
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 6.3
05_01_0453 - 3592555-3592897,3592997-3593067,3593372-3593465,359... 27 8.3
04_04_1047 - 30408962-30409105,30409204-30409304,30409733-30409820 27 8.3
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 27 8.3
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 34.3 bits (75), Expect = 0.072
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
K +L + +EL+ ++ + + +E + +L+ ++ L DE+A Q ++ T L L
Sbjct: 351 KGESLESAMKELDAKMTLLQEKESE-IEALQDKVRSLEDEVAKQKEDFHTADKEADELRL 409
Query: 190 EIATYRALIEGEEDRLN 240
EI R +E E+ LN
Sbjct: 410 EIEDLRLKLEAAEEDLN 426
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/65 (24%), Positives = 36/65 (55%)
Frame = +1
Query: 37 RELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALI 216
+ +R LE E +RH E+ L+ EL++L+D+ R++ ++ + ++ + + +AL
Sbjct: 380 KNAQRLLEEEVSRHVEEKKVLQYELSQLKDDKGDSERKHFSIKEQIQVVNFNVESLQALA 439
Query: 217 EGEED 231
+ D
Sbjct: 440 QEVRD 444
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 31.5 bits (68), Expect = 0.51
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Frame = +1
Query: 46 ERQLESERA-------RHAEDLASLEQELARLRDEMAAQLREYATLMDIKI----SLDLE 192
E+QLE ER RH E+L +EL R R+E+ Q RE + D K+ +L +
Sbjct: 75 EKQLEEERQNHTLTVQRHGEELERQSRELERQREELERQGRE-LKMKDGKLNRMKTLTIV 133
Query: 193 IATYRALIEGE 225
+R IEGE
Sbjct: 134 YEKFRQWIEGE 144
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 31.5 bits (68), Expect = 0.51
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 322 TPSRRGTPLRAARKRTLLDESEE-RSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGKK 498
T +RR R + + +ESEE ++ A + E EA P G+ VKI +GKK
Sbjct: 93 TQTRRRRRRRGRKPKRPAEESEEDEEEEEEEAKAEEAREEENTEAVPIGEPVKITGRGKK 152
Query: 499 E 501
+
Sbjct: 153 Q 153
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 31.1 bits (67), Expect = 0.68
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +1
Query: 1 ARGKNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKIS 180
A+ NAA S RC ELE L E+ E + SLE L + R+ + + +E L +
Sbjct: 389 AKELNAAQS-RCHELESLLLQEK----EKVESLEAVLTKERESLEEKTKEVELLQKALVQ 443
Query: 181 LDLEIATYRALIEGEEDRL 237
+ E + L+E +E L
Sbjct: 444 KENEHSNSLKLVEIKESEL 462
>06_03_0478 -
21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 22 LSNRCRELERQLESERARHAEDLASLEQELARLRD 126
L +R RE ER+ + ER R E LE+E RLR+
Sbjct: 337 LRDRERERERERDRERLRERERERELERERERLRE 371
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 70 ARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDRL 237
A+H + L SLE +L + E +L + + D EIA A GE R+
Sbjct: 307 AKHQKQLESLEAQLTEVSAERTKASETIQSLQMLLVEKDSEIAEIEAASTGEAARI 362
>06_01_0372 +
2684208-2684390,2684867-2684968,2685197-2685290,
2685450-2685532,2685684-2685773,2686931-2687173
Length = 264
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 319 LTPSRRGTPLRAARKRTLLDESEERSVQDYSVTASAKGDLEV-----AEACPDGQFVKI 480
+TPS +R+ R R LL S+ R VQD+S +A+ +L A A P G V +
Sbjct: 160 MTPSTAFEHVRSKRARVLLTRSQWRVVQDFS-KKNAEAELPTVTSHSAAASPAGNVVSV 217
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLESERARHAEDLASLEQELA-RLRDEMAAQLREYATLMD 168
R +NA L + +ELE++L+ A +E + S + E A LR E E +L+D
Sbjct: 338 RLRNAQLPDEAKELEKKLKKIMAEKSEAIRSQDFEKAGALRGEEVELKSEIMSLVD 393
>08_01_0610 -
5367271-5367312,5367737-5367805,5368208-5368360,
5368441-5368548,5368689-5368736,5368868-5369083,
5369195-5369259,5369478-5369602,5369675-5369793
Length = 314
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -1
Query: 516 PAEAEFLLALVPN--LDELSVGAGFGHLEI 433
P + F L L N +D+ +GAGFGH I
Sbjct: 70 PEDTNFALELTYNYGVDKYDIGAGFGHFAI 99
>03_06_0241 - 32587492-32587581,32587673-32587750,32588502-32589422
Length = 362
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLRE 150
RG+ A REL+ +L++ERA + + RL+ E AA E
Sbjct: 53 RGEKEAAEEAARELQAELDAERASAETATSEAMLMIERLQREKAAAQME 101
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 347 CALPVNAPSXXXXXXXXXXXXXSPRAPRGISRWPKPAPTDSSSR 478
CALP+ P+ + R+PR + P+P PT SS R
Sbjct: 289 CALPLE-PASGSPRARVLTPEPATRSPRARVQTPEPEPTASSER 331
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 13 NAALSNRCRELERQLESERARHAEDLASLEQELARLRDEM 132
N L + LERQLE R++ +++ L+ E R D +
Sbjct: 868 NEELREKISSLERQLEEARSKLQDEIIKLQGEKERALDNL 907
>05_01_0453 -
3592555-3592897,3592997-3593067,3593372-3593465,
3593547-3593614,3593694-3593760,3593924-3594054,
3594145-3594252,3594671-3594757,3594991-3595056,
3595564-3595630,3596116-3596192,3596358-3596417,
3597363-3597480,3597833-3597906,3598216-3598312,
3599328-3599380,3599535-3599630,3599768-3599965,
3600556-3600722,3600813-3600882,3601428-3601448,
3602851-3602982
Length = 754
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKI 177
R K AL+ R ++ E ++ + +++A LE++ RDE+ AQL++ + M+I I
Sbjct: 389 RQKEDALNFRVKK-ENEVSTVEKEVLDEIAELEKQ----RDELEAQLKKVSLNMEIAI 441
>04_04_1047 - 30408962-30409105,30409204-30409304,30409733-30409820
Length = 110
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 61 SERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDR 234
+ R + L + EQE ++ + AA+ + A L K + EIA YRA +E E R
Sbjct: 4 NRRQSGIQQLLAAEQEAQQIVN--AARAAKSARLRQAKEEAEREIAEYRAQMEAEFQR 59
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 55 LESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLD 186
LES R + + SLE + +L DE+ +E+ TL+ + L+
Sbjct: 437 LESNRIDVSNKITSLELQNKQLNDELQKVKKEHDTLLKSSVELN 480
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.129 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,943,419
Number of Sequences: 37544
Number of extensions: 148553
Number of successful extensions: 581
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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