Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_B21
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical pr... 92 2e-19
X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein. 92 2e-19
X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic int... 71 8e-13
U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate fi... 71 8e-13
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 69 2e-12
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 66 2e-11
X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic int... 64 5e-11
U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate fi... 64 5e-11
U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate fi... 64 5e-11
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 54 1e-07
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 54 1e-07
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 52 3e-07
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 52 3e-07
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 50 2e-06
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 48 5e-06
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 48 5e-06
U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate fi... 42 2e-04
U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate fi... 42 2e-04
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 36 0.028
X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic int... 33 0.11
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 33 0.11
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 33 0.11
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL021175-4|CAA15971.1| 356|Caenorhabditis elegans Hypothetical ... 29 1.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.4
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.4
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.4
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.4
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.2
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.2
L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical pr... 29 3.2
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 29 3.2
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 28 4.2
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 27 7.4
AL110490-10|CAB54446.1| 430|Caenorhabditis elegans Hypothetical... 27 7.4
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 27 7.4
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 27 9.8
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 27 9.8
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 27 9.8
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 27 9.8
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 27 9.8
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 27 9.8
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 27 9.8
>Z96047-2|CAB09411.1| 566|Caenorhabditis elegans Hypothetical
protein DY3.2 protein.
Length = 566
Score = 92.3 bits (219), Expect = 2e-19
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +1
Query: 13 NAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
NA+L R R +L++ + E L + +A L E+ + E+ L+D+KI LD E
Sbjct: 316 NASLIERLRS---ELDTLKRSFQEKLDDKDARIAELNQEIERMMSEFHDLLDVKIQLDAE 372
Query: 193 IATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRTL 372
+ TY+AL+EGEE+RLNLT ++P S + R ++R +
Sbjct: 373 LKTYQALLEGEEERLNLTQEAPQNTSVHHVSFS------------SGGASAQRGVKRRRV 420
Query: 373 LDESEERSVQDY-----SVTASAKGDLEVAEACPDGQFVKIRNKGKKELSLGGYSILRKA 537
+D + E DY + G + + E +G++V++ N ++E S+GGY ++ KA
Sbjct: 421 VDVNGEDQDIDYLNRRSKLNKETVGPVGIDEVDEEGKWVRVANNSEEEQSIGGYKLVVKA 480
Query: 538 GDQETVFKFQRTVKL 582
G++E F+F +KL
Sbjct: 481 GNKEASFQFSSRMKL 495
>X74027-1|CAA52188.1| 566|Caenorhabditis elegans lamin protein.
Length = 566
Score = 92.3 bits (219), Expect = 2e-19
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +1
Query: 13 NAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
NA+L R R +L++ + E L + +A L E+ + E+ L+D+KI LD E
Sbjct: 316 NASLIERLRS---ELDTLKRSFQEKLDDKDARIAELNQEIERMMSEFHDLLDVKIQLDAE 372
Query: 193 IATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRTL 372
+ TY+AL+EGEE+RLNLT ++P S + R ++R +
Sbjct: 373 LKTYQALLEGEEERLNLTQEAPQNTSVHHVSFS------------SGGASAQRGVKRRRV 420
Query: 373 LDESEERSVQDY-----SVTASAKGDLEVAEACPDGQFVKIRNKGKKELSLGGYSILRKA 537
+D + E DY + G + + E +G++V++ N ++E S+GGY ++ KA
Sbjct: 421 VDVNGEDQDIDYLNRRSKLNKETVGPVGIDEVDEEGKWVRVANNSEEEQSIGGYKLVVKA 480
Query: 538 GDQETVFKFQRTVKL 582
G++E F+F +KL
Sbjct: 481 GNKEASFQFSSRMKL 495
>X70833-1|CAA50181.1| 575|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 575
Score = 70.5 bits (165), Expect = 8e-13
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLESERARHAEDLASLEQELA-------RLRDEMAAQLREYATL 162
RGK A L R LE+Q+E + ED+ S EQ L +LRDE + E L
Sbjct: 339 RGKMADLEGRNLLLEKQIEDLNYQMEEDMRSYEQSLNDKDTSINKLRDESKILMVELQML 398
Query: 163 MDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGT 342
+D K +LD EI YR +++GEE+R L + ++
Sbjct: 399 IDTKQTLDAEIVIYRKMLDGEENRAGL-------------RQLVEQVVKTTSIHQTKEIE 445
Query: 343 PLRAARKRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGKKELSLGGYS 522
LR + T S R SAKG++ + EA P G+++ + N +++ ++G +
Sbjct: 446 SLRVLKGETTSHSSYSR---------SAKGNIAIQEAEPSGKYIVLENISRRDENIGDWK 496
Query: 523 ILRK-AGDQETVFKFQRTVKL 582
+ RK AG +E VF F R L
Sbjct: 497 LRRKIAGKREIVFTFPREFTL 517
>U29379-3|AAF99979.3| 558|Caenorhabditis elegans Intermediate
filament, a protein 4 protein.
Length = 558
Score = 70.5 bits (165), Expect = 8e-13
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 8/201 (3%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLESERARHAEDLASLEQELA-------RLRDEMAAQLREYATL 162
RGK A L R LE+Q+E + ED+ S EQ L +LRDE + E L
Sbjct: 322 RGKMADLEGRNLLLEKQIEDLNYQMEEDMRSYEQSLNDKDTSINKLRDESKILMVELQML 381
Query: 163 MDIKISLDLEIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGT 342
+D K +LD EI YR +++GEE+R L + ++
Sbjct: 382 IDTKQTLDAEIVIYRKMLDGEENRAGL-------------RQLVEQVVKTTSIHQTKEIE 428
Query: 343 PLRAARKRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGKKELSLGGYS 522
LR + T S R SAKG++ + EA P G+++ + N +++ ++G +
Sbjct: 429 SLRVLKGETTSHSSYSR---------SAKGNIAIQEAEPSGKYIVLENISRRDENIGDWK 479
Query: 523 ILRK-AGDQETVFKFQRTVKL 582
+ RK AG +E VF F R L
Sbjct: 480 LRRKIAGKREIVFTFPREFTL 500
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 339 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 398
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T +R + T
Sbjct: 399 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAITQETDTETMRVVKGET 445
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +R SAKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 446 ASRQSFQR---------SAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 496
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 497 RENVYTLPR 505
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 347 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 406
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T +R + T
Sbjct: 407 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAITQETDTETMRVVKGET 453
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +R SAKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 454 ASRQSFQR---------SAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 504
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 505 RENVYTLPR 513
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 347 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 406
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T +R + T
Sbjct: 407 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAITQETDTETMRVVKGET 453
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +R SAKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 454 ASRQSFQR---------SAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 504
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 505 RENVYTLPR 513
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 339 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 398
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T +R + T
Sbjct: 399 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAITQETDTETMRVVKGET 445
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +R SAKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 446 ASRQSFQR---------SAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 496
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 497 RENVYTLPR 505
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 347 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 406
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T +R + T
Sbjct: 407 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAITQETDTETMRVVKGET 453
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +R SAKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 454 ASRQSFQR---------SAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 504
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 505 RENVYTLPR 513
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 347 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 406
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T +R + T
Sbjct: 407 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAITQETDTETMRVVKGET 453
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +R SAKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 454 ASRQSFQR---------SAKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 504
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 505 RENVYTLPR 513
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 66.1 bits (154), Expect = 2e-11
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 2/189 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+ L + +EL QLE ++ + L + ++ ++R+E A + E L+D K +LD
Sbjct: 366 RNSLLEKQIQELNYQLEDDQRSYEAALNDRDSQIRKMREECQALMVELQMLLDTKQTLDA 425
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE+R L +T + +R + T
Sbjct: 426 EIAIYRKMLEGEENRAGL-------------KQLVEQVVKTHAIT--QETETMRVVKGET 470
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+S +RS AKG++ + EA PDG+F+ ++N + K+ ++G + + R+ G
Sbjct: 471 ASRQSFQRS---------AKGNVSIHEASPDGKFIVLQNTHRAKDEAIGEWKLKRRIDGK 521
Query: 544 QETVFKFQR 570
+E V+ R
Sbjct: 522 RENVYTLPR 530
>X70830-1|CAA50178.1| 534|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 534
Score = 64.5 bits (150), Expect = 5e-11
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
KN+ L + L QL ++ ++ L + L R+R+E + E L+D K LD
Sbjct: 327 KNSLLEKEVQNLNYQLTDDQRQYEAALNDRDATLRRMREECQTLVAELQALLDTKQMLDA 386
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE R+ LT L R+ R
Sbjct: 387 EIAIYRKMLEGEETRVGLTQM-------------VEQAVKTHSLQQQENTDSTRSVRGEV 433
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+ +RS AKG++ ++E P+G+F+K+ N + K+ ++G + I RK G
Sbjct: 434 STKTTFQRS---------AKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGR 484
Query: 544 QETVFKFQRTVKLE 585
+E V+ V ++
Sbjct: 485 REIVYSIPANVVIK 498
>U49831-7|AAA93408.1| 558|Caenorhabditis elegans Intermediate
filament, b protein1, isoform a protein.
Length = 558
Score = 64.5 bits (150), Expect = 5e-11
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
KN+ L + L QL ++ ++ L + L R+R+E + E L+D K LD
Sbjct: 327 KNSLLEKEVQNLNYQLTDDQRQYEAALNDRDATLRRMREECQTLVAELQALLDTKQMLDA 386
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE R+ LT L R+ R
Sbjct: 387 EIAIYRKMLEGEETRVGLTQM-------------VEQAVKTHSLQQQENTDSTRSVRGEV 433
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+ +RS AKG++ ++E P+G+F+K+ N + K+ ++G + I RK G
Sbjct: 434 STKTTFQRS---------AKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGR 484
Query: 544 QETVFKFQRTVKLE 585
+E V+ V ++
Sbjct: 485 REIVYSIPANVVIK 498
>U49831-6|AAA93407.1| 589|Caenorhabditis elegans Intermediate
filament, b protein1, isoform b protein.
Length = 589
Score = 64.5 bits (150), Expect = 5e-11
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 2/194 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
KN+ L + L QL ++ ++ L + L R+R+E + E L+D K LD
Sbjct: 358 KNSLLEKEVQNLNYQLTDDQRQYEAALNDRDATLRRMREECQTLVAELQALLDTKQMLDA 417
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
EIA YR ++EGEE R+ LT L R+ R
Sbjct: 418 EIAIYRKMLEGEETRVGLTQM-------------VEQAVKTHSLQQQENTDSTRSVRGEV 464
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
+ +RS AKG++ ++E P+G+F+K+ N + K+ ++G + I RK G
Sbjct: 465 STKTTFQRS---------AKGNVTISECDPNGKFIKLENSHRNKDENVGEHKIRRKLDGR 515
Query: 544 QETVFKFQRTVKLE 585
+E V+ V ++
Sbjct: 516 REIVYSIPANVVIK 529
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N L + +L QLE ++ + L + ++ +LR+E A L E L+D K +LD
Sbjct: 349 RNGLLEKQLEDLNYQLEDDQRSYEAALNDKDAQVRKLREECQALLVELQMLLDTKQTLDG 408
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
E+ YR ++EG + L R+ T +R +
Sbjct: 409 ELKVYRRMLEGNSEENGL------RQLVEKVVRTSAINEEVDTET-------MRVVK--- 452
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
E S Y +A KG++ + E P+G+FV + N + KE LG + + RK G
Sbjct: 453 ----GEHSSRTSYQRSA--KGNVSIKEVSPEGKFVILENTHRDKEEPLGDWKLKRKIDGK 506
Query: 544 QETVFKF 564
+E VF F
Sbjct: 507 REIVFTF 513
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N L + +L QLE ++ + L + ++ +LR+E A L E L+D K +LD
Sbjct: 349 RNGLLEKQLEDLNYQLEDDQRSYEAALNDKDAQVRKLREECQALLVELQMLLDTKQTLDG 408
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
E+ YR ++EG + L R+ T +R +
Sbjct: 409 ELKVYRRMLEGNSEENGL------RQLVEKVVRTSAINEEVDTET-------MRVVK--- 452
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
E S Y +A KG++ + E P+G+FV + N + KE LG + + RK G
Sbjct: 453 ----GEHSSRTSYQRSA--KGNVSIKEVSPEGKFVILENTHRDKEEPLGDWKLKRKIDGK 506
Query: 544 QETVFKF 564
+E VF F
Sbjct: 507 REIVFTF 513
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 53.6 bits (123), Expect = 1e-07
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N L + +L QLE ++ + L + ++ +LR+E A L E L+D K +LD
Sbjct: 349 RNGLLEKQLEDLNYQLEDDQRSYEAALNDKDAQVRKLREECQALLVELQMLLDTKQTLDG 408
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
E+ YR ++EG + L R+ T +R +
Sbjct: 409 ELKVYRRMLEGNSEENGL------RQLVEKVVRTSAINEEVDTET-------MRVVK--- 452
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
E S Y +A KG++ + E P+G+FV + N + KE LG + + RK G
Sbjct: 453 ----GEHSSRTSYQRSA--KGNVSIKEVSPEGKFVILENTHRDKEEPLGDWKLKRKIDGK 506
Query: 544 QETVFKF 564
+E VF F
Sbjct: 507 REIVFTF 513
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 52.0 bits (119), Expect = 3e-07
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N L + +L QLE ++ + L + ++ +LR+E A + E L+D K +LD
Sbjct: 349 RNLLLEKQIEDLNYQLEDDQRSYEAALNDKDAQIRKLREECQALMVELQMLLDTKQTLDG 408
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
E+ YR ++EG + L R+ T +R +
Sbjct: 409 ELKVYRQMLEGNSEGNGL------RQLVEKVVRTSAINEEADTET-------MRVVK--- 452
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
E S Y +A KG++ + E P+G+FV + N + KE LG + + RK G
Sbjct: 453 ----GEHSSRTSYQRSA--KGNVAIKETSPEGKFVILENTHRAKEEPLGDWKLKRKIDGK 506
Query: 544 QETVFKF 564
+E VF F
Sbjct: 507 REIVFTF 513
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 52.0 bits (119), Expect = 3e-07
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N L + +L QLE ++ + L + ++ +LR+E A + E L+D K +LD
Sbjct: 349 RNLLLEKQIEDLNYQLEDDQRSYEAALNDKDAQIRKLREECQALMVELQMLLDTKQTLDG 408
Query: 190 EIATYRALIEGEEDRLNLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRT 369
E+ YR ++EG + L R+ T +R +
Sbjct: 409 ELKVYRQMLEGNSEGNGL------RQLVEKVVRTSAINEEADTET-------MRVVK--- 452
Query: 370 LLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGK-KELSLGGYSILRKA-GD 543
E S Y +A KG++ + E P+G+FV + N + KE LG + + RK G
Sbjct: 453 ----GEHSSRTSYQRSA--KGNVAIKETSPEGKFVILENTHRAKEEPLGDWKLKRKIDGK 506
Query: 544 QETVFKF 564
+E VF F
Sbjct: 507 REIVFTF 513
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+AL L+ QL ++ + +L + L +R++ + E L++ K +LD
Sbjct: 313 RNSALEREANTLQIQLGEDQRAYESELHKRDNALRFMREDCQTLIAELQALLNTKQTLDT 372
Query: 190 EIATYRALIEGEEDRL 237
EIA YR L+E EE RL
Sbjct: 373 EIAIYRKLVESEEGRL 388
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+AL L+ QL ++ + +L + L +R++ + E L++ K +LD
Sbjct: 313 RNSALEREANTLQIQLGEDQRAYESELHKRDNALRFMREDCQTLIAELQALLNTKQTLDT 372
Query: 190 EIATYRALIEGEEDR 234
EIA YR L+E EE R
Sbjct: 373 EIAIYRKLVESEEGR 387
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +1
Query: 10 KNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDL 189
+N+AL L+ QL ++ + +L + L +R++ + E L++ K +LD
Sbjct: 313 RNSALEREANTLQIQLGEDQRAYESELHKRDNALRFMREDCQTLIAELQALLNTKQTLDT 372
Query: 190 EIATYRALIEGEEDR 234
EIA YR L+E EE R
Sbjct: 373 EIAIYRKLVESEEGR 387
>U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate
filament, d protein1, isoform b protein.
Length = 465
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
ALS R +++ + + E + L E + R+RDE A E TL++ +I+L EIA
Sbjct: 334 ALSKRIEDMKFREDEELRMFEQSLTEKELAVTRMRDECAKLSVELETLVENQINLRSEIA 393
Query: 199 TYRALIEGEED 231
YR L+E E+
Sbjct: 394 HYRKLMEQAEN 404
>U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate
filament, d protein1, isoform a protein.
Length = 575
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
ALS R +++ + + E + L E + R+RDE A E TL++ +I+L EIA
Sbjct: 334 ALSKRIEDMKFREDEELRMFEQSLTEKELAVTRMRDECAKLSVELETLVENQINLRSEIA 393
Query: 199 TYRALIEGEED 231
YR L+E E+
Sbjct: 394 HYRKLMEQAEN 404
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 35.5 bits (78), Expect = 0.028
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 16 AALSNRCRELERQLESERARHAED---LASLEQELARLRDEMAAQLREYATLMDIKISLD 186
A L R ELE +LE E RHAE L + +++ L+ ++ + + D+ L
Sbjct: 1823 AKLDMRIHELETELEGENRRHAETQKVLRNKDRKCRELQFQVDEDKKSQERMYDLIEKLQ 1882
Query: 187 LEIATYRALIEGEE 228
+I TY+ IE E
Sbjct: 1883 QKIKTYKRQIEDAE 1896
>X70836-1|CAA50184.1| 636|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 636
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLE----SERARHAE-DLASLEQELARLRDEMAAQLREYATLMD 168
R + A + R LER ++ +E A+ E LA + ++A LRD+ + L D
Sbjct: 317 RSRLAEVEGRNFFLERLIDDLKNNEEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCD 376
Query: 169 IKISLDLEIATYRALIEG 222
+ISL EI YR L+ G
Sbjct: 377 NEISLRAEIERYRILLNG 394
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLE----SERARHAE-DLASLEQELARLRDEMAAQLREYATLMD 168
R + A + R LER ++ +E A+ E LA + ++A LRD+ + L D
Sbjct: 943 RSRLAEVEGRNFFLERLIDDLKNNEEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCD 1002
Query: 169 IKISLDLEIATYRALIEG 222
+ISL EI YR L+ G
Sbjct: 1003 NEISLRAEIERYRILLNG 1020
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 33.5 bits (73), Expect = 0.11
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 4 RGKNAALSNRCRELERQLE----SERARHAE-DLASLEQELARLRDEMAAQLREYATLMD 168
R + A + R LER ++ +E A+ E LA + ++A LRD+ + L D
Sbjct: 943 RSRLAEVEGRNFFLERLIDDLKNNEEAKFFEISLAERDAQIATLRDQCTELSIQMEKLCD 1002
Query: 169 IKISLDLEIATYRALIEG 222
+ISL EI YR L+ G
Sbjct: 1003 NEISLRAEIERYRILLNG 1020
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 37 RELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYR 207
RE ERQLESE + +L S ++ R+ E+ LR Y DI SL++E+ R
Sbjct: 636 RERERQLESEIDKLRIELKSKDESNMRMESELHG-LRNYKEENDID-SLNMELRFVR 690
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 37 RELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
+E + ++E E HA+ + ++ELA+ R E+ ++ D+K+++ E
Sbjct: 303 QEHQDEMERENLAHADAIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEE 354
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 37 RELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
+E + ++E E HA+ + ++ELA+ R E+ ++ D+K+++ E
Sbjct: 303 QEHQDEMERENLAHADAIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEE 354
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 37 RELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
+E + ++E E HA+ + ++ELA+ R E+ ++ D+K+++ E
Sbjct: 303 QEHQDEMERENLAHADAIKHRDEELAQTRAELVKVTEMMKSMSDVKLNVSEE 354
>AL021175-4|CAA15971.1| 356|Caenorhabditis elegans Hypothetical
protein Y6E2A.5 protein.
Length = 356
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 22 LSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKI 177
L ++ E++L +R QEL RLR E A+L+ + +++KI
Sbjct: 142 LKSQEARFEKELREKREEREARKIKAYQELIRLRKESRARLQAFMACLELKI 193
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 55 LESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDR 234
LES L + E EL +L+DE+A L++ + L + K L + R I+ D+
Sbjct: 1010 LESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQ 1069
Query: 235 L 237
L
Sbjct: 1070 L 1070
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 55 LESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDR 234
LES L + E EL +L+DE+A L++ + L + K L + R I+ D+
Sbjct: 1010 LESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQ 1069
Query: 235 L 237
L
Sbjct: 1070 L 1070
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 55 LESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDR 234
LES L + E EL +L+DE+A L++ + L + K L + R I+ D+
Sbjct: 770 LESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQ 829
Query: 235 L 237
L
Sbjct: 830 L 830
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 55 LESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDR 234
LES L + E EL +L+DE+A L++ + L + K L + R I+ D+
Sbjct: 1010 LESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQDLADQ 1069
Query: 235 L 237
L
Sbjct: 1070 L 1070
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 28.7 bits (61), Expect = 3.2
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 2/178 (1%)
Frame = +1
Query: 58 ESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDRL 237
++ERA+ +D+ +++++ + ++ E +RE D+ +E A I + RL
Sbjct: 375 DAERAKLEDDIEAIQKDDSLIKHEKDRLIREIQEKHDLLEKERIEQARVAERIANIQSRL 434
Query: 238 NLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRTLLDESEERSVQDYSVT 417
+ ++ GR L +R R L+ EE +V
Sbjct: 435 IVGSEEDGRLESRTKEQHAQLEKKRRELAEQKR----REREMVEALERQEEDTVDLKQTF 490
Query: 418 ASAKGDLEVAEACPDGQFVKIRNKGKKELS--LGGYSILRKAGDQETVFKFQRTVKLE 585
+ + ++E +K+R + + E+ G YS R+ DQ T+ + + +KL+
Sbjct: 491 SDLRTEVEAKTKKLKKMLIKLR-QARNEIRDVSGAYSDERQDLDQ-TIAEVSKELKLK 546
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 28.7 bits (61), Expect = 3.2
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 2/178 (1%)
Frame = +1
Query: 58 ESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDRL 237
++ERA+ +D+ +++++ + ++ E +RE D+ +E A I + RL
Sbjct: 389 DAERAKLEDDIEAIQKDDSLIKHEKDRLIREIQEKHDLLEKERIEQARVAERIANIQSRL 448
Query: 238 NLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRTLLDESEERSVQDYSVT 417
+ ++ GR L +R R L+ EE +V
Sbjct: 449 IVGSEEDGRLESRTKEQHAQLEKKRRELAEQKR----REREMVEALERQEEDTVDLKQTF 504
Query: 418 ASAKGDLEVAEACPDGQFVKIRNKGKKELS--LGGYSILRKAGDQETVFKFQRTVKLE 585
+ + ++E +K+R + + E+ G YS R+ DQ T+ + + +KL+
Sbjct: 505 SDLRTEVEAKTKKLKKMLIKLR-QARNEIRDVSGAYSDERQDLDQ-TIAEVSKELKLK 560
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 31 RCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKI-SLDLEIATY- 204
R ++ER L+ + A+ EL RLR + A Q +E M+++ S DLE+A
Sbjct: 552 RVMKMERDLDGRIEGYIRSEAAANNELERLRKDTAEQ-KEKLEAMEMEARSKDLELADLT 610
Query: 205 RALIEGEED 231
R L + E+
Sbjct: 611 RKLAKAREE 619
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 31 RCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKI-SLDLEIATY- 204
R ++ER L+ + A+ EL RLR + A Q +E M+++ S DLE+A
Sbjct: 552 RVMKMERDLDGRIEGYIRSEAAANNELERLRKDTAEQ-KEKLEAMEMEARSKDLELADLT 610
Query: 205 RALIEGEED 231
R L + E+
Sbjct: 611 RKLAKAREE 619
>L13200-8|AAA28188.2| 324|Caenorhabditis elegans Hypothetical
protein ZK1236.7 protein.
Length = 324
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 31 RCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRA 210
R E E++ + ERA+ D + E+ L + R+E + +E+ + +K S +E A
Sbjct: 162 REEEREKKRDEERAKEEADEKAEEERLRKEREE--KERKEHEEYLAMKASFAIEEEGTDA 219
Query: 211 LIEGEE 228
IEGEE
Sbjct: 220 -IEGEE 224
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 7 GKNAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQ 141
GK A + +E +RQ+ R E+ E+E + RDE A+
Sbjct: 132 GKRKAAKLQAKEEKRQMREYEVREREERKRREEEREKKRDEERAK 176
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 28.7 bits (61), Expect = 3.2
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 2/178 (1%)
Frame = +1
Query: 58 ESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIEGEEDRL 237
++ERA+ +D+ +++++ + ++ E +RE D+ +E A I + RL
Sbjct: 338 DAERAKLEDDIEAIQKDDSLIKHEKDRLIREIQEKHDLLEKERIEQARVAERIANIQSRL 397
Query: 238 NLTTQSPGREXXXXXXXXXXXXXXXXXLTPSRRGTPLRAARKRTLLDESEERSVQDYSVT 417
+ ++ GR L +R R L+ EE +V
Sbjct: 398 IVGSEEDGRLESRTKEQHAQLEKKRRELAEQKR----REREMVEALERQEEDTVDLKQTF 453
Query: 418 ASAKGDLEVAEACPDGQFVKIRNKGKKELS--LGGYSILRKAGDQETVFKFQRTVKLE 585
+ + ++E +K+R + + E+ G YS R+ DQ T+ + + +KL+
Sbjct: 454 SDLRTEVEAKTKKLKKMLIKLR-QARNEIRDVSGAYSDERQDLDQ-TIAEVSKELKLK 509
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical protein
C54D10.7 protein.
Length = 1144
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 40 ELERQLESERAR--HAEDLASLEQELARLRDEMAAQLREYATLM 165
E ER++E ER + H E L + ++ R R+EM Q +E A M
Sbjct: 898 ENERKMEFERKQTEHEEKLQQMYEQFERDREEMQRQHQERADKM 941
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 346 LRAAR--KRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGKKELSLGGY 519
L AAR K+ L++ EE DY G+L + + CP ++ +E G +
Sbjct: 236 LEAARAAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDW 295
Query: 520 S 522
S
Sbjct: 296 S 296
>AL110490-10|CAB54446.1| 430|Caenorhabditis elegans Hypothetical
protein Y48B6A.10 protein.
Length = 430
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 1 ARGKNAALSNRCRELERQLESERARHAEDL 90
AR + A+ R + ERQ SERAR A+ L
Sbjct: 133 ARPREGAVGKRLNKNERQRASERARRAKAL 162
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 346 LRAAR--KRTLLDESEERSVQDYSVTASAKGDLEVAEACPDGQFVKIRNKGKKELSLGGY 519
L AAR K+ L++ EE DY G+L + + CP ++ +E G +
Sbjct: 236 LEAARAAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDW 295
Query: 520 S 522
S
Sbjct: 296 S 296
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical
protein F53H2.1 protein.
Length = 914
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 40 ELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIATYRALIE 219
EL R+ E AR E E+EL+++R E + + + +K+ + + +R I+
Sbjct: 695 ELRRKREERAARRREH----EEELSKMRQESKQKYLMFFNCLGLKLRFEEQEHNWREWIQ 750
Query: 220 G 222
G
Sbjct: 751 G 751
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 37 RELERQLESERARHAEDLASLEQELARLRDEMAAQLREYAT 159
RE ER+ E E+ + E E+E + R+E A + +E A+
Sbjct: 242 REKEREKEREKQKEREKEREKEREKEKKREEEARRKKEEAS 282
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 13 NAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
N L + REL + E AR + L + L +D+MA + + I+ SL E
Sbjct: 331 NGKLMKQARELRDLNDYEFARFRQQEQELTETLRATQDQMADLQEQLTGVEKIRASLKSE 390
Query: 193 IATYRALIE 219
+ A +E
Sbjct: 391 NESLSASVE 399
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 19 ALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLEIA 198
A + + +++ L+S R R E L +++ D + + +Y+ L +++ L E
Sbjct: 1408 AATKNVQNVKQSLDSWRDRIKERLDEIDRLCTEEGDSLTPE--QYSALREMRRQLADEYD 1465
Query: 199 TYRALIEGEEDRLNL 243
T +EG RLN+
Sbjct: 1466 TVLRTVEGIHTRLNI 1480
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 13 NAALSNRCRELERQLESERARHAEDLASLEQELARLRDEMAAQLREYATLMDIKISLDLE 192
N L + REL + E AR + L + L +D+MA + + I+ SL E
Sbjct: 331 NGKLMKQARELRDLNDYEFARFRQQEQELTETLRATQDQMADLQEQLTGVEKIRASLKSE 390
Query: 193 IATYRALIE 219
+ A +E
Sbjct: 391 NESLSASVE 399
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.129 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,675,104
Number of Sequences: 27780
Number of extensions: 106213
Number of successful extensions: 618
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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