Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B20
         (500 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56558 Cluster: PREDICTED: similar to CG2723-PA;...    40   2e-04
UniRef50_A5V107 Cluster: GHMP kinase; n=2; Roseiflexus|Rep: GHMP...    33   3.6  
UniRef50_Q4TBX6 Cluster: Chromosome undetermined SCAF7082, whole...    33   4.8  
UniRef50_Q54ZU0 Cluster: Putative uncharacterized protein; n=2; ...    32   8.3  

>UniRef50_UPI0000D56558 Cluster: PREDICTED: similar to CG2723-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG2723-PA - Tribolium castaneum
          Length = 285

 Score = 39.5 bits (88), Expect(2) = 2e-04
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = +2

Query: 161 FLLLFLQVFYRNGVHSAQQKLQLSDSYLPVAMQVISHLTDQMSFEV 298
           FL+LF       G    + K  L DS++P +MQ+I+H+T+ M F++
Sbjct: 5   FLVLFYAQTCLGGPPKVENKPMLLDSFIPASMQIIAHVTELMKFDL 50



 Score = 27.5 bits (58), Expect(2) = 2e-04
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 413 STNISALHDQTTPYHKPGLYAPASPPKP 496
           ST  +     T P HKPG+YAP +P  P
Sbjct: 57  STTTTTTMRPTRP-HKPGIYAPEAPLGP 83


>UniRef50_A5V107 Cluster: GHMP kinase; n=2; Roseiflexus|Rep: GHMP
           kinase - Roseiflexus sp. RS-1
          Length = 347

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -1

Query: 332 STLAS*SMSIHQLRKTSGP*DERSLASPQGDRSRRVAAFVALNVLHFYKTLVEIT 168
           STLA  +M+  QL +T+   + R L +P G + +  AAF  LN   F    V +T
Sbjct: 123 STLAGNAMNKRQLAETAYEIETRRLEAPIGKQDQYAAAFGGLNCFEFSADGVRVT 177


>UniRef50_Q4TBX6 Cluster: Chromosome undetermined SCAF7082, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF7082, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 1688

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +2

Query: 353 ITSPYIGSFQLIPNGWWMSYSTNISALHDQTTPYHKPGLYAPAS 484
           +  P  G ++   +GW+  Y  +++A HDQ+  Y +P    P+S
Sbjct: 761 VPGPADGPYRSRADGWYGRYEGHLAAYHDQSYQYREPQPERPSS 804


>UniRef50_Q54ZU0 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 344

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +3

Query: 36  ISNNRFNI*KDVFIKQTSRVWRFFRFIFYVFINR---IKT*FALPFCCYFYKCFIEMEYI 206
           I+  +F    ++  K+   V+  F  I  + INR   +K+ + LPF   F K FI+   +
Sbjct: 11  ITLKKFKFILNIIQKRKKLVFLLFLSILSIIINRKLILKSLYQLPFLPNFIKLFIQKNLL 70

Query: 207 QRNKSCNS 230
             N  CNS
Sbjct: 71  SSN-DCNS 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,809,906
Number of Sequences: 1657284
Number of extensions: 9596810
Number of successful extensions: 25145
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25138
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)