Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B20
         (500 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061140-1|AAL28688.1|  325|Drosophila melanogaster LD11958p pro...    28   8.2  
AE014297-690|AAF54181.1|  325|Drosophila melanogaster CG2723-PA ...    28   8.2  
AE013599-154|AAF57279.1|  224|Drosophila melanogaster CG14589-PA...    28   8.2  

>AY061140-1|AAL28688.1|  325|Drosophila melanogaster LD11958p
           protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +2

Query: 389 PNGWWMS---YSTNISALHDQTTPYHKPGLYAPASPPK 493
           P  WW +    ST        T P H+P ++AP +PP+
Sbjct: 109 PPSWWETPKRSSTTERPTSPPTVP-HRPAIFAPTAPPE 145


>AE014297-690|AAF54181.1|  325|Drosophila melanogaster CG2723-PA
           protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +2

Query: 389 PNGWWMS---YSTNISALHDQTTPYHKPGLYAPASPPK 493
           P  WW +    ST        T P H+P ++AP +PP+
Sbjct: 109 PPSWWETPKRSSTTERPTSPPTVP-HRPAIFAPTAPPE 145


>AE013599-154|AAF57279.1|  224|Drosophila melanogaster CG14589-PA
           protein.
          Length = 224

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +3

Query: 6   RPSPAQPTVVISNNRFNI*KDVFIKQT 86
           +P PA+P + I+N+ F++ + +F+  +
Sbjct: 130 KPRPAEPNIYITNSHFHLTRQMFLNDS 156


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,717,544
Number of Sequences: 53049
Number of extensions: 459890
Number of successful extensions: 1320
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)