Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B18
         (420 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   2.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   3.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    20   8.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 348 LKRIVFKYTFACI 310
           LKR++F ++F CI
Sbjct: 6   LKRVLFFFSFCCI 18


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 272 KYLKMHVLLSNQKI 313
           KY +MH LL+N K+
Sbjct: 156 KYRQMHRLLANYKV 169


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 83  KIKYACPLCTSKLFI 39
           K  YA  LCT K+F+
Sbjct: 69  KSVYASLLCTEKIFL 83


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 305 DYLIIHAFLNIFHQCFIF 252
           D L++    N+F+ CF F
Sbjct: 311 DTLVVIYTFNLFYLCFCF 328


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 305 DYLIIHAFLNIFHQCFIF 252
           D L++    N+F+ CF F
Sbjct: 267 DTLVVIYTFNLFYLCFCF 284


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 408 TNNNNGQLTVVF*NTSLYHYLKRI 337
           TNNNN + +       +Y ++KR+
Sbjct: 184 TNNNNSKSSQSSNPPQIYPWMKRV 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,796
Number of Sequences: 336
Number of extensions: 1606
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)