Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B18
         (420 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK130544-1|BAC85376.1|  122|Homo sapiens protein ( Homo sapiens ...    30   3.6  

>AK130544-1|BAC85376.1|  122|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27034 fis, clone SLV07984. ).
          Length = 122

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = -1

Query: 345 KRIVFKYTF-ACIF*LLNNTCIFKYFSPVFYFY 250
           ++I+F ++F  CIF L++N C F + + ++Y Y
Sbjct: 81  RKIMFLFSFNLCIF-LMSNVCFFLFMNHLYYVY 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,309,984
Number of Sequences: 237096
Number of extensions: 725079
Number of successful extensions: 4393
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4393
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)