Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B17
         (485 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   2.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   2.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.9  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 393 RLARYYKTKSVLPPNWK 443
           RL  Y  T+SVL  +WK
Sbjct: 159 RLRMYINTESVLDGDWK 175


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 209 LCNTMRVPEHDTDLGRSKTLFAKFEDLFL 123
           +CN+    E +T     +T+FA F D  +
Sbjct: 444 ICNSFTKFEFNTVFNDQRTVFANFYDAMI 472


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 405 YYKTKSVLPPNWKYESSNSVC 467
           Y + K   PP W ++  N  C
Sbjct: 45  YPRQKKSHPPQWTWQCINQRC 65


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/44 (29%), Positives = 16/44 (36%)
 Frame = +2

Query: 182  AQGLSWCCTSQICYW*KDPAYHESYGSCS*STGRFVLPDQEGCR 313
            A GL W    +IC W K     E       ST  +  P +   R
Sbjct: 1132 AGGLHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYR 1175


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 59  PVGAAVPPQCP 91
           PVG A+PP  P
Sbjct: 120 PVGVALPPTLP 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,325
Number of Sequences: 336
Number of extensions: 2348
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)