Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B16
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.46 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.9  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = -3

Query: 251 HQTLSARIVGSHPLSLSFAQVEYGSWVRHTPTNRDLGYGLFLQYR*HLAGRRPIVFSTKR 72
           H+ LSA +   HPLSLS    ++ + + H P    + + L  +     +   P  FS  R
Sbjct: 324 HEELSAMVNRCHPLSLS---SDHQAMLHHNP----MSHHLKQEPSGFTSSNHP--FSINR 374

Query: 71  LVPNSAARGSI 39
           L+P + ++  I
Sbjct: 375 LLPTAESKADI 385


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 51  GCRIRHEALCGEHNGAP 101
           GC +    LCG H+  P
Sbjct: 103 GCEMPSAGLCGSHDEIP 119


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 51  GCRIRHEALCGEHNGAP 101
           GC +    LCG H+  P
Sbjct: 51  GCEMPSAGLCGSHDEIP 67


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 51  GCRIRHEALCGEHNGAP 101
           GC +    LCG H+  P
Sbjct: 234 GCEMPSAGLCGSHDEIP 250


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 523 LCLPTVT*AYRHNGLSNTHTRYC 455
           +CL  +T   R NGL+   T+ C
Sbjct: 33  ICLFPITINIRKNGLNYNFTKKC 55


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 198 KRERQWMTSHYACT*C 245
           ++E QW +S   CT C
Sbjct: 681 RQEAQWTSSDNPCTTC 696


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 97  RRPARCYRYCKNKPYPKSRFVGVCLTQDPYSTWAKESDS 213
           R P     +  N P   ++  G C+  D   T  KE+ S
Sbjct: 747 RNPVGTNPHDINNPLSVNQLTGQCVRNDSSDTNGKETRS 785


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +1

Query: 97  RRPARCYRYCKNKPYPKSRFVGVCLTQDPYSTWAKESDS 213
           R P     +  N P   ++  G C+  D   T  KE+ S
Sbjct: 639 RNPVGTNPHDINNPLSVNQLTGQCVRNDSSDTNGKETRS 677


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,547
Number of Sequences: 336
Number of extensions: 4204
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)