Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B14
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146722-1|AAO12082.1|  107|Anopheles gambiae odorant-binding pr...    24   2.8  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    24   2.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   3.7  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   5.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.7  

>AY146722-1|AAO12082.1|  107|Anopheles gambiae odorant-binding
           protein AgamOBP16 protein.
          Length = 107

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -2

Query: 268 IVVATAAPDNTDISIKASLKSFSPKNIGVQAQFRSSC 158
           IVVAT+       S  A  KS SP+ +    QFRS C
Sbjct: 4   IVVATSICLMATASANAP-KSLSPELLQQMGQFRSEC 39


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -2

Query: 268 IVVATAAPDNTDISIKASLKSFSPKNIGVQAQFRSSC 158
           IVVAT+       S  A  KS SP+ +    QFRS C
Sbjct: 4   IVVATSICLMATASANAP-KSLSPELLQQMGQFRSEC 39


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 449 IKYCDDYSLIRILYKSLLCLVDSRFGIVLPDGVGECAGV 333
           +KY D YSL  +   SLL L ++    V P+    C+ +
Sbjct: 428 LKYLDAYSLNGLYALSLLSLDNNALTGVHPEAFRNCSSL 466


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 392 LVDSRFGIVLPDGVGECAGVP 330
           L  SRF +    GVG C G P
Sbjct: 405 LPPSRFDVAASGGVGPCFGEP 425


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 117 IRHIPPTPDRRRYPFHC 67
           +R  PPTP  R+  F C
Sbjct: 495 VRAAPPTPPERQRCFRC 511


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,872
Number of Sequences: 2352
Number of extensions: 10700
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)