Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B12
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   3.1  
AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding pr...    24   4.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.1  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +1

Query: 328 EMRNVELEQYALSLDQFGKRLANIKFNKKEEINLRNETLEEKLQLL 465
           E +N+E+++    L +   R+  +   +KEE   R E L+ +++ L
Sbjct: 104 EEQNLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKAQMEKL 149


>AY146728-1|AAO12088.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP21 protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 19  QEFGTRINLDKELADSQKAMDNIKNMFSSIPTFDSEGEAARGDL 150
           ++F T++ L     DS+ A   I+ MF+ +  F  E  AA  D+
Sbjct: 41  EDFATKMRLGDLTLDSETAKCTIQCMFAKV-GFTLESGAANRDV 83


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1    SGSPGLQEFGTRIN-LDKELADSQKAMDNIKNMFSSIPTFDSEGEAARGDLRHA 159
            SG    +E  ++++ L+K    + KAM  +  +   I + + E EAAR   + A
Sbjct: 1002 SGDSLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFEAARKKAKKA 1055


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,900
Number of Sequences: 2352
Number of extensions: 10255
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)