Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_B11
(547 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 287 2e-79
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 2.2
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 3.8
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 6.6
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 23 6.6
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 6.6
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 8.7
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 8.7
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 8.7
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 8.7
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 23 8.7
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 287 bits (704), Expect = 2e-79
Identities = 129/163 (79%), Positives = 142/163 (87%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG D+LY
Sbjct: 61 TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVYGAM 546
G T+VTG+EY VEPVD GP AFRCYLDVGLARTTTG+RV+GAM
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAM 163
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.6 bits (51), Expect = 2.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +1
Query: 418 GATEVTGDEYNVEPVDNGPG 477
G T+ +GD+ ++ DNG G
Sbjct: 2011 GGTDASGDDLEIDACDNGCG 2030
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 3.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 215 TISRYFGVLYLFLSWTTRRL 156
TI RYF + + FLS T +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.0 bits (47), Expect = 6.6
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 539 PYTRAPVVVRAKPTSK*HLNAPGPLSTGSTLYSSPVTSVAPV-*RLSKPSLCN 384
P+ + +V+ A K APGP ST+ T+VAP+ +L SL N
Sbjct: 539 PFIDSEIVLSALAQLKPSF-APGPDGIPSTVLKRCQTTVAPILAKLFNASLAN 590
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 223 ITVQSVGTLECCICFYPGQRGVCEHSSQ 140
+ QSV L C C P C+ S+Q
Sbjct: 19 LLAQSVSALRCYQCASPSSWSDCQASAQ 46
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 6.6
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 369 QQTSAVGSSIVSQTHLDTIAWEFM 298
++ SA+ + VSQ+ ++T WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 214 QSVGTLECCICFYPGQRGVCEHSSQ 140
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 125 VVREKLTTMLANASLSRIKTNTTLQSTD 208
V+RE L + + +KTN +STD
Sbjct: 1983 VMREALVNLTRESCYQIVKTNEVPESTD 2010
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 22.6 bits (46), Expect = 8.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 97 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 207
KR+ V R GK++++ + V+ D+ + P+ R
Sbjct: 25 KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 22.6 bits (46), Expect = 8.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 465 VNWFNIIFITSDFSGTCVETVQAEPLQQSSCQQQTSAVGSSIVS 334
+N FN+ G C V P Q + ++AVGS+I S
Sbjct: 310 LNLFNMDVTKKCLIGECWVPVPDLPKVQKALSDGSAAVGSTIPS 353
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,537
Number of Sequences: 2352
Number of extensions: 12164
Number of successful extensions: 58
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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