Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B10
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   1.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.0  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 455 PHTNSNEETEPAPGKTKGVY 514
           PH N+ +  +P   + KGVY
Sbjct: 438 PHPNTYQIADPVTNEIKGVY 457


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 83  HRLVYFRHSYE 51
           HRLVYF++ YE
Sbjct: 320 HRLVYFQNEYE 330


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 116 SRSELAICSVLYTHTFAITIWNMASV 193
           S S   I S  YT++   +IW+ AS+
Sbjct: 199 STSSPTIASATYTNSANSSIWSPASI 224


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 366 YDWVQYHRLHHAHFATEDD 422
           +DWV Y    H H + + +
Sbjct: 82  FDWVYYESRAHIHCSVKSE 100


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 443 FPPLPHTNSNE 475
           FPP+ H N NE
Sbjct: 95  FPPINHQNYNE 105


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 443 FPPLPHTNSNE 475
           FPP+ H N NE
Sbjct: 95  FPPINHQNYNE 105


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 443 FPPLPHTNSNE 475
           FPP+ H N NE
Sbjct: 95  FPPINHQNYNE 105


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +1

Query: 139 FCSLYTYICYHYMEYGF 189
           +C L   +C +Y  Y F
Sbjct: 229 YCVLIILLCIYYFYYAF 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,097
Number of Sequences: 336
Number of extensions: 2873
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)