Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B08
         (488 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.4  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   4.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 333 LGKVVT-KKFSNMETCVEIGESVR 401
           L KVV  KK  N  TC +IG S R
Sbjct: 146 LRKVVPLKKLCNNGTCEDIGNSHR 169


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 298 WPKRSSTDWALISVKLLP 351
           W KR+   W  ISV ++P
Sbjct: 198 WGKRAYVTWYSISVFMVP 215


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 443 DLTATALYYVNIFTAY*FANFHTRFHVAKLLGNNFT 336
           D+TA  +  +NIF +Y FA    +F   K++   F+
Sbjct: 374 DMTAIYVLLINIFASY-FAYIFGKF-ACKIMIQGFS 407


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 443 DLTATALYYVNIFTAY*FANFHTRFHVAKLLGNNFT 336
           D+TA  +  +NIF +Y FA    +F   K++   F+
Sbjct: 374 DMTAIYVLLINIFASY-FAYIFGKF-ACKIMIQGFS 407


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 443 DLTATALYYVNIFTAY*FANFHTRFHVAKLLGNNFT 336
           D+TA  +  +NIF +Y FA    +F   K++   F+
Sbjct: 374 DMTAIYVLLINIFASY-FAYIFGKF-ACKIMIQGFS 407


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 443 DLTATALYYVNIFTAY*FANFHTRFHVAKLLGNNFT 336
           D+TA  +  +NIF +Y FA    +F   K++   F+
Sbjct: 374 DMTAIYVLLINIFASY-FAYIFGKF-ACKIMIQGFS 407


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/32 (25%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 31   SCIKNGTTAAQRIPTLTVCLIVY*TY-INSLS 123
            +C+K G      +P++ + L++Y  + +N++S
Sbjct: 1000 NCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVS 1031


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/32 (25%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 31   SCIKNGTTAAQRIPTLTVCLIVY*TY-INSLS 123
            +C+K G      +P++ + L++Y  + +N++S
Sbjct: 1000 NCLKYGVIYYVTVPSMYLLLVIYSVFNMNNVS 1031


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,923
Number of Sequences: 336
Number of extensions: 1990
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)