Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B08
         (488 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical pr...   128   3e-30
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...   128   3e-30
U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical pr...   126   1e-29
U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical pr...   115   2e-26
Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical pr...    77   9e-15
Z31590-7|CAA83463.1|  361|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    28   4.2  
U39855-4|AAA81083.1|  290|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z19155-4|CAA79560.3|  844|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>U00036-6|AAK29853.1|  377|Caenorhabditis elegans Hypothetical
           protein R151.2a protein.
          Length = 377

 Score =  128 bits (308), Expect = 3e-30
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +3

Query: 252 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 431
           RMPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS 
Sbjct: 58  RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 117

Query: 432 SGEINDNLIELLIMINACK 488
           +GEINDNL+ELLIMINACK
Sbjct: 118 AGEINDNLMELLIMINACK 136


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score =  128 bits (308), Expect = 3e-30
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +3

Query: 252 RMPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSG 431
           RMPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS 
Sbjct: 127 RMPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSA 186

Query: 432 SGEINDNLIELLIMINACK 488
           +GEINDNL+ELLIMINACK
Sbjct: 187 AGEINDNLMELLIMINACK 205


>U00036-7|AAK29858.2|  319|Caenorhabditis elegans Hypothetical
           protein R151.2b protein.
          Length = 319

 Score =  126 bits (303), Expect = 1e-29
 Identities = 59/78 (75%), Positives = 68/78 (87%)
 Frame = +3

Query: 255 MPNIKVFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGS 434
           MPNIKVFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS +
Sbjct: 1   MPNIKVFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAA 60

Query: 435 GEINDNLIELLIMINACK 488
           GEINDNL+ELLIMINACK
Sbjct: 61  GEINDNLMELLIMINACK 78


>U00036-8|AAL06052.1|  318|Caenorhabditis elegans Hypothetical
           protein R151.2c protein.
          Length = 318

 Score =  115 bits (276), Expect = 2e-26
 Identities = 54/73 (73%), Positives = 63/73 (86%)
 Frame = +3

Query: 270 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 449
           VFSGSSHPDL+ +I +RL +++ K   KKFSN ET VEIGESVRGEDVYI+QS +GEIND
Sbjct: 5   VFSGSSHPDLSTRICERLQLEVSKASLKKFSNKETNVEIGESVRGEDVYIIQSAAGEIND 64

Query: 450 NLIELLIMINACK 488
           NL+ELLIMINACK
Sbjct: 65  NLMELLIMINACK 77


>Z68014-5|CAA92027.1|  353|Caenorhabditis elegans Hypothetical
           protein W04G3.5 protein.
          Length = 353

 Score = 76.6 bits (180), Expect = 9e-15
 Identities = 34/73 (46%), Positives = 55/73 (75%)
 Frame = +3

Query: 270 VFSGSSHPDLAQKIVDRLGIDLGKVVTKKFSNMETCVEIGESVRGEDVYIVQSGSGEIND 449
           + +G+SHP+LA+ + +RL I LG+      +N ET V+I +SVRG+ V+I+QSGS  +N+
Sbjct: 13  LLTGNSHPELAKMVSERLEIRLGEATVYNKTNRETSVDIKQSVRGKHVFILQSGSKNVNN 72

Query: 450 NLIELLIMINACK 488
           +++ELL++I ACK
Sbjct: 73  DVMELLVLIYACK 85


>Z31590-7|CAA83463.1|  361|Caenorhabditis elegans Hypothetical
           protein R01H10.6 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 164 DATVDCVDEIDSNVRRSSQ*IRPRSTTNYKNAEHQGLQRKLAPGLGPK 307
           D  +D +D  + +V    + IRP +  +Y + EH     K  P L P+
Sbjct: 291 DDEIDIIDNNEDDVEIDDK-IRPDAFASYFDGEHTATDEKQLPVLNPE 337


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -2

Query: 184  DTIHGRVSSLASSDMRRDNNKINYLCKS 101
            + +H  +SSL  S++RR +N+++ + KS
Sbjct: 2582 EDLHSAISSLHRSELRRVSNRVHLIMKS 2609


>U39855-4|AAA81083.1|  290|Caenorhabditis elegans Hypothetical
           protein F18G5.5 protein.
          Length = 290

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -2

Query: 247 VSGRTWSNLLTTSSNVTVDF--IDTI-HGRVSSLASSDMRRDNNKINYL 110
           VS  T   +++ S+   V+F  +D I +GR SSL S  +R DN  +N L
Sbjct: 137 VSNGTTQVIVSNSTIEDVEFPSVDEILNGRYSSLKSKTLRLDNISLNRL 185


>U28944-4|AAK68192.1|  376|Caenorhabditis elegans Hypothetical
           protein C18A3.5b protein.
          Length = 376

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 208 SNVTVDFIDTIHGRVSSLASSDMRRDNNKINYLCKSNKR*DKRST 74
           S VT DFI T+  ++ S+  + +  D  K+N+  +  ++  K  T
Sbjct: 55  STVTEDFIATLFNQIGSVTKTKVIFDEMKVNWAVEPGQQQSKIDT 99


>Z19155-4|CAA79560.3|  844|Caenorhabditis elegans Hypothetical
           protein F54G8.5 protein.
          Length = 844

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -2

Query: 361 LNFLVTTLPRSMPSRSTIFWAKSGCELPLKTLMFGILVVSGRTWSNLL 218
           ++  ++ +PR   + STIFW+ S   L  +    G L++    W++L+
Sbjct: 228 IDLFLSAIPRYKETNSTIFWSSSK-SLAKEMERNGELLIPWMPWTSLV 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,153,839
Number of Sequences: 27780
Number of extensions: 194072
Number of successful extensions: 569
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)