Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B07
         (481 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P31920 Cluster: Uncharacterized 35.4 kDa protein in rbc...    36   0.62 
UniRef50_Q8DS10 Cluster: Putative uncharacterized protein; n=1; ...    32   5.8  
UniRef50_Q7RDQ4 Cluster: Vps26 protein homolog; n=5; Apicomplexa...    32   5.8  
UniRef50_Q7R8Q8 Cluster: Putative uncharacterized protein PY0716...    32   5.8  
UniRef50_Q2LPK4 Cluster: Heterodisulfide reductase, subunit A an...    32   7.7  
UniRef50_Q22Z46 Cluster: Putative uncharacterized protein; n=1; ...    32   7.7  

>UniRef50_P31920 Cluster: Uncharacterized 35.4 kDa protein in
           rbcL-atpE intergenic region; n=1; Euglena gracilis|Rep:
           Uncharacterized 35.4 kDa protein in rbcL-atpE intergenic
           region - Euglena gracilis
          Length = 295

 Score = 35.5 bits (78), Expect = 0.62
 Identities = 20/69 (28%), Positives = 39/69 (56%)
 Frame = +2

Query: 251 FRENILIGATQKRTKRHLNVTFYLTQCKMPVLI**AELYYSKLPRYVDYKSNKCLCFVCY 430
           F +N +I   + +     NV  ++  C+ P      EL+++++PRY + K+N CL F  +
Sbjct: 103 FDKNTIISIEKAKGDSPGNVGGFIINCRDPE----EELFWNRIPRY-ESKNNNCLSFK-F 156

Query: 431 VWRFNLVYK 457
           + ++NL+ K
Sbjct: 157 ITQYNLIEK 165


>UniRef50_Q8DS10 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus mutans|Rep: Putative uncharacterized
           protein - Streptococcus mutans
          Length = 617

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 12/34 (35%), Positives = 26/34 (76%)
 Frame = +3

Query: 15  ASPIDYTLHFLVYLLIIGYIAFL*INKYNFLHIY 116
           +S + Y++ FL+Y +II YI+++ IN+ ++++ Y
Sbjct: 34  SSYLSYSIVFLIYAIIITYISYISINRGSWMYDY 67


>UniRef50_Q7RDQ4 Cluster: Vps26 protein homolog; n=5;
           Apicomplexa|Rep: Vps26 protein homolog - Plasmodium
           yoelii yoelii
          Length = 314

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 17/61 (27%), Positives = 26/61 (42%)
 Frame = -2

Query: 306 FRWRFVRFCVAPIKIFSLKYPNKIFESKRLLLNYSVGCLNEVNSIQTQICCPSIINNTLK 127
           F+W+F          F      + F    ++  YS     E++ I   IC P  INNT+K
Sbjct: 120 FKWKFSSVDKQYESYFGKNAELRYFVRLNIIKGYSGNIQKEIDFIVQNICIPPEINNTIK 179

Query: 126 L 124
           +
Sbjct: 180 M 180


>UniRef50_Q7R8Q8 Cluster: Putative uncharacterized protein PY07162;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY07162 - Plasmodium yoelii yoelii
          Length = 1473

 Score = 32.3 bits (70), Expect = 5.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 362 LYYSKLPRYVDYKSNKCLCFVCYVWRFNLV 451
           +Y +   +Y+D   NKC+ ++  VW +NL+
Sbjct: 217 IYINNYYKYIDILGNKCIKYILEVWIYNLI 246


>UniRef50_Q2LPK4 Cluster: Heterodisulfide reductase, subunit A and
           related polyferredoxins; n=9; Deltaproteobacteria|Rep:
           Heterodisulfide reductase, subunit A and related
           polyferredoxins - Syntrophus aciditrophicus (strain SB)
          Length = 1039

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 237 IFESKRLLLNYSVGCLNEVNSIQTQICCPSIINNTLKL 124
           + +++ + +   VGC NE  +   +ICC   I N LKL
Sbjct: 747 VVQARNVAMIQCVGCRNEDRNYCARICCSHAIKNALKL 784


>UniRef50_Q22Z46 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 425

 Score = 31.9 bits (69), Expect = 7.7
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -2

Query: 297 RFVRFCVAPIKIFSLKYPNKIFESKRLLLNYSVGCLNEVNS 175
           RFV FC+  I  +S K  N+IF+     LNY +G +  V +
Sbjct: 182 RFVEFCMKQISEYSKKSENQIFQFTIGRLNYELGDIQIVKT 222


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,196,513
Number of Sequences: 1657284
Number of extensions: 7544226
Number of successful extensions: 14561
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14561
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)