Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_B04
(494 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O14579 Cluster: Coatomer subunit epsilon; n=42; Eumetaz... 157 1e-37
UniRef50_UPI00005A3B99 Cluster: PREDICTED: similar to epsilon su... 129 4e-29
UniRef50_Q7Q558 Cluster: ENSANGP00000011535; n=1; Anopheles gamb... 122 4e-27
UniRef50_O64748 Cluster: Coatomer subunit epsilon-2; n=12; Magno... 108 8e-23
UniRef50_Q55FU2 Cluster: Putative uncharacterized protein; n=1; ... 100 4e-20
UniRef50_A6NKA3 Cluster: Uncharacterized protein COPE; n=10; Deu... 96 4e-19
UniRef50_O62246 Cluster: Probable coatomer subunit epsilon; n=2;... 88 1e-16
UniRef50_Q9Y0Y5 Cluster: CG9543-PA; n=3; Sophophora|Rep: CG9543-... 84 2e-15
UniRef50_Q5DEQ9 Cluster: SJCHGC01641 protein; n=2; Schistosoma j... 82 6e-15
UniRef50_A5B6P3 Cluster: Putative uncharacterized protein; n=1; ... 75 7e-13
UniRef50_Q6QP55 Cluster: Epsilon-COP; n=1; Zea mays|Rep: Epsilon... 50 4e-05
UniRef50_A2EB98 Cluster: Coatomer epsilon subunit family protein... 50 4e-05
UniRef50_Q01CY6 Cluster: Coatomer epsilon subunit; n=2; Ostreoco... 48 9e-05
UniRef50_Q4Q5A7 Cluster: Coatomer epsilon subunit, putative; n=3... 48 2e-04
UniRef50_A2D8V7 Cluster: Coatomer epsilon subunit family protein... 47 2e-04
UniRef50_A2QRK2 Cluster: Function: epsilon-COP together with oth... 41 0.013
UniRef50_Q381U5 Cluster: Coatomer epsilon subunit, putative; n=3... 37 0.22
UniRef50_Q5KID6 Cluster: Expressed protein; n=1; Filobasidiella ... 37 0.28
UniRef50_Q5YDB5 Cluster: C-terminal domain phosphatase-like 2; n... 34 1.5
UniRef50_Q7S6M8 Cluster: Putative uncharacterized protein NCU048... 34 2.0
UniRef50_UPI0000D9E5C3 Cluster: PREDICTED: similar to USP6 N-ter... 33 2.7
UniRef50_Q5WBW0 Cluster: Acetyl-CoA acetyltransferase; n=1; Baci... 33 2.7
UniRef50_A0HIL3 Cluster: Type I secretion outer membrane protein... 33 3.5
UniRef50_Q6CTY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 3.5
UniRef50_Q71W48 Cluster: Conserved domain protein; n=1; Listeria... 33 4.6
UniRef50_Q7VX34 Cluster: Putative exported protein; n=4; Bordete... 32 6.1
UniRef50_Q63WE0 Cluster: Putative type I restriction enzyme spec... 32 6.1
UniRef50_Q5P8B8 Cluster: Predicted ferritin/ribonucleotide reduc... 32 6.1
UniRef50_Q3JA47 Cluster: Peptidase M48, Ste24p precursor; n=1; N... 32 6.1
UniRef50_A0JMI8 Cluster: Zgc:153824; n=4; Danio rerio|Rep: Zgc:1... 32 8.1
UniRef50_Q183R6 Cluster: Putative collagen-binding protein precu... 32 8.1
UniRef50_Q75CF6 Cluster: ACL037Wp; n=1; Eremothecium gossypii|Re... 32 8.1
>UniRef50_O14579 Cluster: Coatomer subunit epsilon; n=42;
Eumetazoa|Rep: Coatomer subunit epsilon - Homo sapiens
(Human)
Length = 308
Score = 157 bits (382), Expect = 1e-37
Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
Frame = +3
Query: 15 DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
+VDELFDV+NAFY+G+YQQ INEAQR+ SSP ++RDVFLYR+Y+AQ +VL E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
++ P LQ ++ DYL+ + + +IVA++D +++ +++N F ++AA+IY ++ N +
Sbjct: 75 PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134
Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
AAL+ H + +E A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175
>UniRef50_UPI00005A3B99 Cluster: PREDICTED: similar to epsilon
subunit of coatomer protein complex isoform a isoform 3;
n=2; Eutheria|Rep: PREDICTED: similar to epsilon subunit
of coatomer protein complex isoform a isoform 3 - Canis
familiaris
Length = 279
Score = 129 bits (311), Expect = 4e-29
Identities = 57/123 (46%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Frame = +3
Query: 15 DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
+VDELFDV+NAFY+G+YQQ INEAQR+ PSSP ++RDVFLYR+Y+AQ + +VL E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIK 74
Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
++ P LQ ++ +YL+ + + +IV ++D +++ +++N F ++AA+IY+++ N +
Sbjct: 75 PSSAPELQAVRMFAEYLANDSQRDSIVVELDREMSRSVDVTNTTFLLMAASIYFHDQNPD 134
Query: 372 AAL 380
AAL
Sbjct: 135 AAL 137
>UniRef50_Q7Q558 Cluster: ENSANGP00000011535; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011535 - Anopheles gambiae
str. PEST
Length = 306
Score = 122 bits (294), Expect = 4e-27
Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +3
Query: 6 RQQDVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQ 185
R +V EL DV NAFY+GNYQ INE +I+ +S L++D+F+YRSYIAQ +R+VL
Sbjct: 7 RNNEVSELIDVENAFYIGNYQTCINECNKISKAS----LEKDIFMYRSYIAQHKYRVVLD 62
Query: 186 ELKTA-DPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYED 362
E+K + D L L+ L +Y+S A K AIV+ D + + V+ +V A IY E+
Sbjct: 63 EIKPSNDTPLLALRYLAEYMSNSARKEAIVSIFDEKFQGDINELHVVWIIVGAIIYCNEE 122
Query: 363 NYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQE 491
YE A+K+ +E + + CLL M+R DLA++ +QE
Sbjct: 123 TYETAMKVLVGNFNLECPSLHMHCLLKMSRVDLAKQVATTMQE 165
>UniRef50_O64748 Cluster: Coatomer subunit epsilon-2; n=12;
Magnoliophyta|Rep: Coatomer subunit epsilon-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 293
Score = 108 bits (259), Expect = 8e-23
Identities = 56/159 (35%), Positives = 100/159 (62%), Gaps = 1/159 (0%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQEL-KT 197
D LF++RN FY+G YQ AIN ++ N SP A++RD ++RSYIA G++++V+ E+ ++
Sbjct: 9 DHLFNLRNNFYLGAYQTAINNSEIAN-LSPENAVERDCLVFRSYIALGSYQLVISEIDES 67
Query: 198 ADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAA 377
A LQ +K L YLS NK + ++ + +A T +N+ ++A I+ +E++Y
Sbjct: 68 AATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNET 127
Query: 378 LKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
LK H ++L A ++Q + M+R + A K+L+++Q++
Sbjct: 128 LKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQI 166
>UniRef50_Q55FU2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 300
Score = 99.5 bits (237), Expect = 4e-20
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQRINPS--SPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
D LF+ +N FY+GNYQ INE + + + + D FLYR YIAQGN+ +VLQE K
Sbjct: 4 DILFESKNYFYLGNYQSTINEINKKSRQIIEKSLKAESDYFLYRCYIAQGNYDLVLQETK 63
Query: 195 T-----ADPILQPLKSLVDYLS-PGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYY 356
DP + L+ L YLS P N+ + I ++ G N V+ ATIY+
Sbjct: 64 NNRGSGEDPTIAGLQLLASYLSKPDENREGTLITITQWISDGVVKFNYHLQVIIATIYFN 123
Query: 357 EDNYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
E Y+ AL+I ++ + +E + IQ L ++R DLA+K ++++
Sbjct: 124 EQLYDEALQILNNCDHIEGLSMLIQIFLKIDRLDLAQKAYDTMKKI 169
>UniRef50_A6NKA3 Cluster: Uncharacterized protein COPE; n=10;
Deuterostomia|Rep: Uncharacterized protein COPE - Homo
sapiens (Human)
Length = 257
Score = 95.9 bits (228), Expect = 4e-19
Identities = 46/90 (51%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +3
Query: 15 DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
+VDELFDV+NAFY+G+YQQ INEAQR+ SSP ++RDVFLYR+Y+AQ +VL E+K
Sbjct: 15 EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74
Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADI 281
++ P LQ ++ DYL+ + A+ I
Sbjct: 75 PSSAPELQAVRMFADYLAHESRSTAMTVQI 104
Score = 35.1 bits (77), Expect = 0.87
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Frame = +3
Query: 375 ALKIFHDIELVELR--AYSIQCLLAMNRPDLARKELKLLQEL 494
A+++F D E R A ++Q LL ++R DLARKELK +Q+L
Sbjct: 83 AVRMFADYLAHESRSTAMTVQILLKLDRLDLARKELKRMQDL 124
>UniRef50_O62246 Cluster: Probable coatomer subunit epsilon; n=2;
Caenorhabditis|Rep: Probable coatomer subunit epsilon -
Caenorhabditis elegans
Length = 292
Score = 87.8 bits (208), Expect = 1e-16
Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQEL--K 194
D+LF +RN F++G+YQ I EA + + + ++DV+LYRSYIAQG I L+E+
Sbjct: 3 DKLFSIRNYFFLGSYQSCIGEALKFSSKNEEEKQEKDVYLYRSYIAQGQAFIPLKEIPAA 62
Query: 195 TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEA 374
T L ++ ++ + A K I+A++ VA + +E+ V+AATI D +
Sbjct: 63 TKSADLAAVRRYAEFRNNPAAKKKILAEVQEEVA-SRNIKSEIAAVLAATILNEADLSQD 121
Query: 375 ALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
A + E +E RA + L+ MN+ LA E+K + ++
Sbjct: 122 AFRAVSRFEGLEARASKVFILIKMNKRKLAIGEVKKMNQI 161
>UniRef50_Q9Y0Y5 Cluster: CG9543-PA; n=3; Sophophora|Rep: CG9543-PA
- Drosophila melanogaster (Fruit fly)
Length = 306
Score = 83.8 bits (198), Expect = 2e-15
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
Frame = +3
Query: 3 TRQQDVDE----LFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNH 170
+RQQ+ ++ LFD RN +Y+GN+ +IN + P + ++Y SY+A +
Sbjct: 2 SRQQNEEDTNSVLFDARNEYYIGNFMGSINF---VLPEQGTAGPELLSYMYLSYLAIDSG 58
Query: 171 RIVLQELKTADPI-LQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATI 347
RIV ++K + LQ L+ + + + ++ + +VA G E ++H+ A +
Sbjct: 59 RIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIV 117
Query: 348 YYYEDNYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
Y ++ +E ALKI H +E A S+QCLL + R DLA++ + +QE+
Sbjct: 118 YCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEI 166
>UniRef50_Q5DEQ9 Cluster: SJCHGC01641 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC01641 protein - Schistosoma
japonicum (Blood fluke)
Length = 296
Score = 82.2 bits (194), Expect = 6e-15
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Frame = +3
Query: 27 LFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK--TA 200
L D +AF +G++Q A+ Q++ S ++ V LY+ YIAQ + +VL E+ T
Sbjct: 7 LLDAHSAFILGHHQLALKTLQKLKLDSSDTKIR--VLLYKLYIAQKKYGVVLDEIPEDTI 64
Query: 201 DPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAAL 380
P + L+ LV YLS ++ + + +++ + +E S + ++A TIY D EAA
Sbjct: 65 IPEFRLLRLLVKYLSKMESRQSTLEELELMFKQSSEFSQDAV-IIAVTIYLNMDMDEAAW 123
Query: 381 KIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQ 488
++ H A ++QCLL MNR DLA K ++ +Q
Sbjct: 124 RLLHGSNDTYCNALTVQCLLHMNRCDLAGKIVRRMQ 159
>UniRef50_A5B6P3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 173
Score = 75.4 bits (177), Expect = 7e-13
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQEL-KT 197
D LF +RN F++G +Q AIN + N SP +++RD ++RSYIA G++++V+ E+ +
Sbjct: 5 DLLFGLRNNFFLGAFQAAINNSDIPN-LSPEDSIERDCLVHRSYIALGSYQLVINEIDSS 63
Query: 198 ADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAA 377
A LQ +K L LS NK + ++ + + +N + ++A ++ +E +Y A
Sbjct: 64 AATPLQAVKLLALXLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDYNEA 123
Query: 378 LKIFHDIELVELRAYSIQ 431
LK H +EL IQ
Sbjct: 124 LKHTHPGGTMELDFIRIQ 141
>UniRef50_Q6QP55 Cluster: Epsilon-COP; n=1; Zea mays|Rep:
Epsilon-COP - Zea mays (Maize)
Length = 135
Score = 49.6 bits (113), Expect = 4e-05
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNH--RIVLQELK 194
D LF++RN FY+G YQ AIN + + A +RD ++RSYIA G++ R L
Sbjct: 5 DLLFNLRNLFYLGAYQAAINNIDILGLDA-AAAAERDAIVFRSYIALGSYQVRTHLASGA 63
Query: 195 TADPILQPLKSLVDYLS 245
+A LQ +K L YL+
Sbjct: 64 SAATSLQAVKLLALYLT 80
>UniRef50_A2EB98 Cluster: Coatomer epsilon subunit family protein;
n=1; Trichomonas vaginalis G3|Rep: Coatomer epsilon
subunit family protein - Trichomonas vaginalis G3
Length = 273
Score = 49.6 bits (113), Expect = 4e-05
Identities = 37/153 (24%), Positives = 68/153 (44%)
Frame = +3
Query: 33 DVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKTADPIL 212
++ ++FY G Y + +++ + + Q + + R+ + G VL ++K +
Sbjct: 3 EIHDSFYAGLYSKVLSDTKDMKKLDE----QTEFMVLRARLNLGQTDFVLNQVKAQANDM 58
Query: 213 QPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAALKIFH 392
L+ N +A++ + T +N + + A +Y DN AL +
Sbjct: 59 HKGVYLIAQAKK-CNNETEIANLIPVGDEQTVATNPYYAISKAMLYIMSDNIPDALLTLN 117
Query: 393 DIELVELRAYSIQCLLAMNRPDLARKELKLLQE 491
E A I CLL +NRPDLA+KEL+ + E
Sbjct: 118 GNTNSEAIAERIHCLLLLNRPDLAQKELENISE 150
>UniRef50_Q01CY6 Cluster: Coatomer epsilon subunit; n=2;
Ostreococcus|Rep: Coatomer epsilon subunit -
Ostreococcus tauri
Length = 302
Score = 48.4 bits (110), Expect = 9e-05
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQRINPS---SPLVALQRDVFLYRSYIAQGNHRIVLQEL 191
+ LF N ++VG Y+ A++ A+ + SP +R+ R+ +A G V+ +
Sbjct: 5 ESLFRCENMYHVGAYRDAVDAARACDVDGDLSPAECEKRESLRLRARLALGEIDDVIASV 64
Query: 192 KT----ADPILQPLKSLVDY-----LSPGANKPAIVADIDARVAKGTELSNEVFHVVAAT 344
+ A P + K L Y + + A+ D A + + + + AT
Sbjct: 65 EAMGTNAGPGARSCKVLAMYERAVRTGDESGRNALCEDALASLEETSGTMDAWTRASNAT 124
Query: 345 IYYYEDNYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
+ E Y AL++ H +E+ A ++ L AM+RP+LA K + +Q++
Sbjct: 125 VLAREGRYAEALRLCHGSSDLEVMAVAVSVLCAMDRPELAEKHARAMQQV 174
>UniRef50_Q4Q5A7 Cluster: Coatomer epsilon subunit, putative; n=3;
Leishmania|Rep: Coatomer epsilon subunit, putative -
Leishmania major
Length = 323
Score = 47.6 bits (108), Expect = 2e-04
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 27/185 (14%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQ--RINPSSPL-VA---LQRDVFLYRSYIAQGNHRIVL 182
D LFDVRNA VGNY QAI + R S P VA +++ + I G V+
Sbjct: 3 DVLFDVRNALVVGNYHQAIADGSTARALSSRPADVAAFNVEKSAVVALGQIGLGQVDAVI 62
Query: 183 QELKT-ADPILQPLKSLVDYLSPGANKPAI---VADIDARVAKGTE--LSNEVFHVV-AA 341
+L++ ++P+L +++ + + + A+ V ++ R+ E ++ V+ V AA
Sbjct: 63 SQLRSESNPLLVTIRTWAELICAMRDYDALSDPVTNVTQRLQSDAEKVAADAVYKAVFAA 122
Query: 342 TIYYYEDNYEAALKIFHDI--EL------------VELRAYSIQCLLAMNRPDLARKELK 479
T Y+ + AL + EL VEL + + LL +NRPD A KE+K
Sbjct: 123 TSLLYQQDVIGALTLAKKWLGELPNPEGVLARRYTVELHGVATEALLRLNRPDEAAKEVK 182
Query: 480 LLQEL 494
++++
Sbjct: 183 RMEQV 187
>UniRef50_A2D8V7 Cluster: Coatomer epsilon subunit family protein;
n=1; Trichomonas vaginalis G3|Rep: Coatomer epsilon
subunit family protein - Trichomonas vaginalis G3
Length = 276
Score = 47.2 bits (107), Expect = 2e-04
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Frame = +3
Query: 33 DVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELKTAD-PI 209
++ + +Y+G YQ+ + S P + + +YRS +A G V+ + + D P+
Sbjct: 3 ELADYYYLGFYQKVATDG-----SKPEIPEEGQFMVYRSNLALGKVDYVINQTRRGDSPM 57
Query: 210 LQPLKSLVDYLSPGAN--KPAIVAD-IDARVAKGTELSNEVFHVVAATIYYYEDNYEA-A 377
+ + L + + N K + D D + G++ ++ + I Y N A
Sbjct: 58 AKGINILANVMKMEDNDTKVKYITDNFDIQAKNGSQ-----YYTICIAICYLLCNKPGDA 112
Query: 378 LKIFHDIELVELRAYSIQCLLAMNRPDLARKEL 476
L++ HD++ E IQ LLA++RP+LA +E+
Sbjct: 113 LELIHDLKHPEAGMIRIQALLALDRPELASEEI 145
>UniRef50_A2QRK2 Cluster: Function: epsilon-COP together with other
COP-subunits assembels into the coatomer; n=16;
Pezizomycotina|Rep: Function: epsilon-COP together with
other COP-subunits assembels into the coatomer -
Aspergillus niger
Length = 324
Score = 41.1 bits (92), Expect = 0.013
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +3
Query: 18 VDELFDVRNAFYVGNYQQAIN-EAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
+ EL ++ NAF+ G YQ I + ++P + L A V R+ IA G VL +++
Sbjct: 36 ITELINIHNAFHQGQYQAVIEFDTSALSPENQLPA---RVLQLRAKIALGQSDEVLADVE 92
Query: 195 TAD--PILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNY 368
+ P L +K+L S G + A+ D +A+ N V+ T+ +
Sbjct: 93 GEEETPDLAAVKALAQQ-STGDAESALKLAQD--LAENYP-DNATVQVLCGTLLQAQGQS 148
Query: 369 EAALKIF--HDIELVELRAYSIQCLLAMNRPDLARKELK 479
E AL + H L E A +Q L NR DLA KE++
Sbjct: 149 EDALALLTKHQGNL-EAVALIVQIHLQQNRSDLALKEVQ 186
>UniRef50_Q381U5 Cluster: Coatomer epsilon subunit, putative; n=3;
Trypanosoma|Rep: Coatomer epsilon subunit, putative -
Trypanosoma brucei
Length = 324
Score = 37.1 bits (82), Expect = 0.22
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Frame = +3
Query: 21 DELFDVRNAFYVGNYQQAINEAQ----RINPSSPLVAL--QRDVFLYRSYIAQGNHRIVL 182
D +D RNA +GNY QA+ EA + + A +++V L + G V+
Sbjct: 3 DPFYDARNALALGNYHQAVAEASGTKTDARKAEDIAAFHAEKEVLLALAQTGLGQGDAVV 62
Query: 183 QELKTAD-PILQPLKSLVDYLSPGANKPA-IVAD--IDARVAKGTELS-------NEVFH 329
+LK A PIL ++ + S N I +D I ++ K TE + ++
Sbjct: 63 AQLKAATCPILVAVREWAVFCSAMKNLSGDIQSDPVICMQLKKLTEAAEVIDPARTQIAV 122
Query: 330 VVAATIYYYEDNYEAALKIF--------HDIE------LVELRAYSIQCLLAMNRPDLAR 467
+ AA + DN ALK+ H E +ELR ++ LL M R ++AR
Sbjct: 123 LAAAALLAVGDN-AGALKLSKEWLNDQRHSRENSLLRLHMELRVIVVEALLRMGRTEMAR 181
Query: 468 KELKLLQE 491
E+K +++
Sbjct: 182 SEVKAMEQ 189
>UniRef50_Q5KID6 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 306
Score = 36.7 bits (81), Expect = 0.28
Identities = 40/169 (23%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Frame = +3
Query: 15 DVDELFDVRNAFYVGNYQQAINEAQRI--NPSSPLVALQRDVFLYRSYIA-----QGNHR 173
+ D L+ V+ FY +YQ I+EA PS +L R +++ RS++A +
Sbjct: 2 EADPLYHVKQLFYQASYQACISEASEYPHTPSDDPSSLHRALYIARSHLALPSPSPSSAH 61
Query: 174 IVLQELKTADPILQPLKSLVDYLS-------PGANKPAIVADIDARVAKGTELSNE-VFH 329
+L + P+ +++ + S K V D+ G + E
Sbjct: 62 AILAPFLSLSPVPLSARAVDAFASIHEAEEDAREEKVEEVRDLVLECEGGNDEEEEKTVR 121
Query: 330 VVAATIY-YYEDNYEAALKIFHDI--ELVELRAYSIQCLLAMNRPDLAR 467
+AA+++ +N EA + + +E A +Q LL++NR DLA+
Sbjct: 122 AIAASVFILVGENEEAVATLTEGAAKDDLECIAILVQLLLSLNRRDLAQ 170
>UniRef50_Q5YDB5 Cluster: C-terminal domain phosphatase-like 2; n=2;
Arabidopsis thaliana|Rep: C-terminal domain
phosphatase-like 2 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 770
Score = 34.3 bits (75), Expect = 1.5
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 168 HRIVLQELKTADPILQP--LKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAA 341
H I L+EL+ ++P KSL+ + G P + ID R+ + HVV+A
Sbjct: 302 HLISLKELRDRIVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVSA 361
Query: 342 TIYYYEDNYEAALKIFH 392
+ YY E AL + H
Sbjct: 362 YLPYYAPQAETALVVPH 378
>UniRef50_Q7S6M8 Cluster: Putative uncharacterized protein
NCU04807.1; n=3; Sordariomycetes|Rep: Putative
uncharacterized protein NCU04807.1 - Neurospora crassa
Length = 744
Score = 33.9 bits (74), Expect = 2.0
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 177 VLQELKTADPILQPLKSLVDYLSPGANKPA-IVADIDARVAKGTELSN 317
VL KTA L P++S++D ++PG KP + DI A + T LSN
Sbjct: 81 VLPHAKTASSYLAPVRSMLD-IAPGPAKPVRSMLDIPAATSSRTPLSN 127
>UniRef50_UPI0000D9E5C3 Cluster: PREDICTED: similar to USP6
N-terminal like; n=1; Macaca mulatta|Rep: PREDICTED:
similar to USP6 N-terminal like - Macaca mulatta
Length = 450
Score = 33.5 bits (73), Expect = 2.7
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -3
Query: 276 LLLWQVYLLQEINNLLGISEVEVSGQRSSTLARQYG----GYPERYTNGRGKHLV 124
L LW VYLL+ L+ I+ + QRS + Q+G G R T GR H V
Sbjct: 353 LRLWDVYLLEGEQVLMPITSIAFKVQRSKSPCAQWGLGSPGVRRRLTRGRLPHTV 407
>UniRef50_Q5WBW0 Cluster: Acetyl-CoA acetyltransferase; n=1;
Bacillus clausii KSM-K16|Rep: Acetyl-CoA
acetyltransferase - Bacillus clausii (strain KSM-K16)
Length = 378
Score = 33.5 bits (73), Expect = 2.7
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Frame = +3
Query: 111 LVALQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKSL-VDYLSPGANKPAI------ 269
+VAL+ ++ + IAQ I L+++ TA P+ PL+ L +S GA +
Sbjct: 165 MVALKNRMYAQANPIAQFQKAISLEDVLTARPVTDPLRLLDCSPISDGAAAVVLQKSESG 224
Query: 270 VADIDARVAKGTELSNEVFHV--VAATIYYYEDNYEAALKIFHDIELVELR-AYSIQCLL 440
V + + A GT L EV ++ + AT + Y A D++ VEL +SI L+
Sbjct: 225 VRVLSSGQASGTPLMQEVGNLLRIEATHRAAQQAYAQAGLGPEDVDAVELHDCFSITELI 284
Query: 441 AM 446
A+
Sbjct: 285 AI 286
>UniRef50_A0HIL3 Cluster: Type I secretion outer membrane protein,
TolC family precursor; n=1; Comamonas testosteroni
KF-1|Rep: Type I secretion outer membrane protein, TolC
family precursor - Comamonas testosteroni KF-1
Length = 460
Score = 33.1 bits (72), Expect = 3.5
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 156 AQGNHRIVLQELKTADPILQPLKSLVDYLSPG---ANKPAIVADIDARV 293
AQG + L ELK AD L P S+ S G A++PA D+D RV
Sbjct: 269 AQGQRALALAELKAADAQLMPTLSVDGSASRGLTAASRPAGYPDLDMRV 317
>UniRef50_Q6CTY1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome C of strain NRRL
Y- 1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 293
Score = 33.1 bits (72), Expect = 3.5
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 24 ELFDVRNAFYVGNYQQAINEAQRIN 98
+ F V+ FY GNY++A+NE + N
Sbjct: 2 DYFTVKQQFYTGNYEEALNEVSKFN 26
>UniRef50_Q71W48 Cluster: Conserved domain protein; n=1; Listeria
monocytogenes str. 4b F2365|Rep: Conserved domain
protein - Listeria monocytogenes serotype 4b (strain
F2365)
Length = 321
Score = 32.7 bits (71), Expect = 4.6
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 279 IDARVAKGTELSNEVFHVVAATIYYYE-DNYE-AALKIFHDIELVELRAYSIQCL 437
ID AK T+ +FH+ A T Y+Y YE LK + EL++ Y+I L
Sbjct: 171 IDLGSAKSTKAETTMFHIAAPTKYFYSAPEYENIHLKNKTEFELIKAEIYTIGLL 225
>UniRef50_Q7VX34 Cluster: Putative exported protein; n=4;
Bordetella|Rep: Putative exported protein - Bordetella
pertussis
Length = 570
Score = 32.3 bits (70), Expect = 6.1
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 57 GNYQQAINEAQRIN-PSSPLVALQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKSLV 233
GN A+ + +R P++P ALQ R+ A+ RIV + A P +
Sbjct: 33 GNPVDALPQLERPTAPAAPAPALQAPTPEQRAVQARLAQRIVPRNFDVAGVHALPFDQVA 92
Query: 234 DYLSPGANKPAIVADIDARVAKGTEL 311
+L+P A K VA + +V + TEL
Sbjct: 93 AFLTPLAGKEITVAQLVQQVDRITEL 118
>UniRef50_Q63WE0 Cluster: Putative type I restriction enzyme
specificity protein; n=1; Burkholderia pseudomallei|Rep:
Putative type I restriction enzyme specificity protein -
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Length = 429
Score = 32.3 bits (70), Expect = 6.1
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +3
Query: 54 VGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQG-NHRIVLQELKTADPILQ--PLK 224
+G + + +N + V + +V Y Y+ Q H +L LK+A P + +
Sbjct: 302 IGEFVLLEEDCWPLNTALYTVQMHDNVPKYLWYMLQSLKHIFILNSLKSAVPGVDRNDIH 361
Query: 225 SLVDYLSPGANKPAIVADIDARVAK 299
+ L P +PAIVA +DA ++K
Sbjct: 362 PAIVCLPPAEEQPAIVAFLDAEISK 386
>UniRef50_Q5P8B8 Cluster: Predicted ferritin/ribonucleotide
reductase-like protein; n=2; Proteobacteria|Rep:
Predicted ferritin/ribonucleotide reductase-like protein
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 233
Score = 32.3 bits (70), Expect = 6.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 60 NYQQAINEAQRINPSSPLVALQRD--VFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
NY +AI ++RI+P++P +LQ+ + LY +Y A+ + +++ P KS
Sbjct: 3 NYDEAILRSRRIDPAAPFASLQQGLRIALYDAYAARAFYTKMVEAFGPRAPFADLAKS 60
>UniRef50_Q3JA47 Cluster: Peptidase M48, Ste24p precursor; n=1;
Nitrosococcus oceani ATCC 19707|Rep: Peptidase M48,
Ste24p precursor - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 670
Score = 32.3 bits (70), Expect = 6.1
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +3
Query: 240 LSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYEAALKIFHDI--ELVEL 413
L G NKP++ + + + + ++L NE+ +++ ++ DNY+ A K F+ +L +
Sbjct: 536 LDSGFNKPSVFS-VTGKYSALSQLENEIGILLSLLVHAEHDNYKDAEKAFNAAKRQLDNI 594
Query: 414 RAYSIQ-CLLAMNRPDLARKELKLLQEL 494
+Q ++ +N D A L LL+ L
Sbjct: 595 HIKLLQSSIINLNELDTAIDRLALLKPL 622
>UniRef50_A0JMI8 Cluster: Zgc:153824; n=4; Danio rerio|Rep:
Zgc:153824 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 822
Score = 31.9 bits (69), Expect = 8.1
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = +3
Query: 168 HRIVLQELKTADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATI 347
H+++LQ+ + +L KS++ YL+ +++ ++ + V + S+ V H
Sbjct: 296 HKLILQQYQHPTRLL---KSVLGYLAVDSSRRPLLKQVLRSVCQVWCNSSAVKHTCVEQQ 352
Query: 348 YYYEDNYEAALKIFHDIELVELRAYSIQCLL 440
Y + + D E+ ELR +QC+L
Sbjct: 353 LYVSKALLLCVALLDDSEIQELRQEMLQCML 383
>UniRef50_Q183R6 Cluster: Putative collagen-binding protein
precursor; n=3; Clostridium difficile|Rep: Putative
collagen-binding protein precursor - Clostridium
difficile (strain 630)
Length = 972
Score = 31.9 bits (69), Expect = 8.1
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -1
Query: 179 DNTVVTLSDIRTVEENISLKSY--QGR*RINALCLVNSLLVISNIKCISNIE 30
D V+ SD + V+ I++ +Y ++N L VNS+L ISNIK N+E
Sbjct: 615 DKKVLNSSDNQIVKYKINMSTYGVYDAGQVNLLDEVNSVLEISNIKYSDNLE 666
>UniRef50_Q75CF6 Cluster: ACL037Wp; n=1; Eremothecium
gossypii|Rep: ACL037Wp - Ashbya gossypii (Yeast)
(Eremothecium gossypii)
Length = 287
Score = 31.9 bits (69), Expect = 8.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 24 ELFDVRNAFYVGNYQQAINEAQR 92
+ F V+ FY GNY+QA+ EA++
Sbjct: 2 DYFSVKQQFYTGNYRQALQEAEK 24
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,429,060
Number of Sequences: 1657284
Number of extensions: 9421993
Number of successful extensions: 25971
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 25312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25950
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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