SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B04
         (494 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456886-1|CAG33167.1|  308|Homo sapiens COPE protein.                157   1e-38
BC017285-1|AAH17285.1|  308|Homo sapiens coatomer protein comple...   157   1e-38
BC007250-1|AAH07250.1|  308|Homo sapiens coatomer protein comple...   157   1e-38
BC003155-1|AAH03155.1|  308|Homo sapiens coatomer protein comple...   157   1e-38
AK222584-1|BAD96304.1|  308|Homo sapiens epsilon subunit of coat...   157   1e-38
AJ249366-1|CAB55628.1|  308|Homo sapiens epsilon-COP protein pro...   157   1e-38
AJ131182-1|CAA10316.1|  308|Homo sapiens Epsilon COP protein.         157   3e-38
AF092438-1|AAP97213.1|  307|Homo sapiens epsilon-COP protein.         153   4e-37
AC002985-1|AAB81543.1|  147|Homo sapiens epsilon-COP protein.         129   5e-30
AC005197-2|AAC24612.1|  245|Homo sapiens COPE_HUMAN protein.           86   7e-17
X89713-1|CAA61857.1|  907|Homo sapiens death associated protein ...    30   3.8  
U76111-1|AAC51166.1|  907|Homo sapiens translation repressor NAT...    30   3.8  
U73824-1|AAB49973.1|  907|Homo sapiens p97 protein.                    30   3.8  
BC111548-1|AAI11549.2|  869|Homo sapiens eukaryotic translation ...    30   3.8  
BC111415-1|AAI11416.1|  907|Homo sapiens eukaryotic translation ...    30   3.8  
BC065276-1|AAH65276.1|  701|Homo sapiens EIF4G2 protein protein.       30   3.8  
BC043149-1|AAH43149.2|  907|Homo sapiens eukaryotic translation ...    30   3.8  
BC039851-1|AAH39851.1|  907|Homo sapiens eukaryotic translation ...    30   3.8  
BC018975-1|AAH18975.1|  907|Homo sapiens eukaryotic translation ...    30   3.8  
BC018746-1|AAH18746.1|  907|Homo sapiens eukaryotic translation ...    30   3.8  
BC014930-1|AAH14930.2|  352|Homo sapiens EIF4G2 protein protein.       30   3.8  
AY513274-1|AAT08027.1|  701|Homo sapiens aging-associated protei...    30   3.8  
AK223548-1|BAD97268.1|  907|Homo sapiens eukaryotic translation ...    30   3.8  
AB209267-1|BAD92504.1|  940|Homo sapiens eukaryotic translation ...    30   3.8  

>CR456886-1|CAG33167.1|  308|Homo sapiens COPE protein.
          Length = 308

 Score =  157 bits (382), Expect = 1e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>BC017285-1|AAH17285.1|  308|Homo sapiens coatomer protein complex,
           subunit epsilon protein.
          Length = 308

 Score =  157 bits (382), Expect = 1e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>BC007250-1|AAH07250.1|  308|Homo sapiens coatomer protein complex,
           subunit epsilon protein.
          Length = 308

 Score =  157 bits (382), Expect = 1e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>BC003155-1|AAH03155.1|  308|Homo sapiens coatomer protein complex,
           subunit epsilon protein.
          Length = 308

 Score =  157 bits (382), Expect = 1e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>AK222584-1|BAD96304.1|  308|Homo sapiens epsilon subunit of
           coatomer protein complex isoform a variant protein.
          Length = 308

 Score =  157 bits (382), Expect = 1e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>AJ249366-1|CAB55628.1|  308|Homo sapiens epsilon-COP protein
           protein.
          Length = 308

 Score =  157 bits (382), Expect = 1e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>AJ131182-1|CAA10316.1|  308|Homo sapiens Epsilon COP protein.
          Length = 308

 Score =  157 bits (380), Expect = 3e-38
 Identities = 75/161 (46%), Positives = 117/161 (72%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 135 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 175


>AF092438-1|AAP97213.1|  307|Homo sapiens epsilon-COP protein.
          Length = 307

 Score =  153 bits (370), Expect = 4e-37
 Identities = 73/161 (45%), Positives = 114/161 (70%), Gaps = 1/161 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEA  +  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 14  EVDELFDVKNAFYIGSYQQCINEAHGVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 73

Query: 195 TAD-PILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            +  P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 74  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 133

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 134 AALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 174


>AC002985-1|AAB81543.1|  147|Homo sapiens epsilon-COP protein.
          Length = 147

 Score =  129 bits (312), Expect = 5e-30
 Identities = 60/133 (45%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = +3

Query: 15  DVDELFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNHRIVLQELK 194
           +VDELFDV+NAFY+G+YQQ INEAQR+  SSP   ++RDVFLYR+Y+AQ    +VL E+K
Sbjct: 15  EVDELFDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIK 74

Query: 195 -TADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
            ++ P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY ++ N +
Sbjct: 75  PSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPD 134

Query: 372 AALKIFHDIELVE 410
           AAL+  H  + +E
Sbjct: 135 AALRALHQGDSLE 147


>AC005197-2|AAC24612.1|  245|Homo sapiens COPE_HUMAN protein.
          Length = 245

 Score = 85.8 bits (203), Expect = 7e-17
 Identities = 41/108 (37%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = +3

Query: 174 IVLQELKTAD-PILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIY 350
           +VL E+K +  P LQ ++   DYL+  + + +IVA++D  +++  +++N  F ++AA+IY
Sbjct: 5   VVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIY 64

Query: 351 YYEDNYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
            ++ N +AAL+  H  + +E  A ++Q LL ++R DLARKELK +Q+L
Sbjct: 65  LHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDL 112


>X89713-1|CAA61857.1|  907|Homo sapiens death associated protein 5
           protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>U76111-1|AAC51166.1|  907|Homo sapiens translation repressor NAT1
           protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>U73824-1|AAB49973.1|  907|Homo sapiens p97 protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>BC111548-1|AAI11549.2|  869|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 869

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 594 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 629


>BC111415-1|AAI11416.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>BC065276-1|AAH65276.1|  701|Homo sapiens EIF4G2 protein protein.
          Length = 701

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 426 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 461


>BC043149-1|AAH43149.2|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>BC039851-1|AAH39851.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>BC018975-1|AAH18975.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>BC018746-1|AAH18746.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>BC014930-1|AAH14930.2|  352|Homo sapiens EIF4G2 protein protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 77  LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 112


>AY513274-1|AAT08027.1|  701|Homo sapiens aging-associated protein 1
           protein.
          Length = 701

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 426 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 461


>AK223548-1|BAD97268.1|  907|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 variant protein.
          Length = 907

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 632 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 667


>AB209267-1|BAD92504.1|  940|Homo sapiens eukaryotic translation
           initiation factor 4 gamma, 2 variant protein.
          Length = 940

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +3

Query: 120 LQRDVFLYRSYIAQGNHRIVLQELKTADPILQPLKS 227
           L+ D+ L +SY+AQ   R ++ EL +   + QPL+S
Sbjct: 665 LEVDIPLVKSYLAQFAARAIISELVSISELAQPLES 700


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,652,190
Number of Sequences: 237096
Number of extensions: 1445800
Number of successful extensions: 6204
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6192
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -