Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B04
         (494 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD2988...    84   1e-16
AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA...    84   1e-16
L42511-1|AAC41607.1|  224|Drosophila melanogaster shortsighted c...    28   8.0  
AE014134-2215|AAF53200.2|  219|Drosophila melanogaster CG5461-PB...    28   8.0  

>AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD29885
           protein.
          Length = 306

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
 Frame = +3

Query: 3   TRQQDVDE----LFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNH 170
           +RQQ+ ++    LFD RN +Y+GN+  +IN    + P       +   ++Y SY+A  + 
Sbjct: 2   SRQQNEEDTNSVLFDARNEYYIGNFMGSINF---VLPEQGTAGPELLSYMYLSYLAIDSG 58

Query: 171 RIVLQELKTADPI-LQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATI 347
           RIV  ++K  +   LQ L+ + +     +    ++  +  +VA G E    ++H+  A +
Sbjct: 59  RIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIV 117

Query: 348 YYYEDNYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           Y ++  +E ALKI H    +E  A S+QCLL + R DLA++ +  +QE+
Sbjct: 118 YCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEI 166


>AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA
           protein.
          Length = 306

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 5/169 (2%)
 Frame = +3

Query: 3   TRQQDVDE----LFDVRNAFYVGNYQQAINEAQRINPSSPLVALQRDVFLYRSYIAQGNH 170
           +RQQ+ ++    LFD RN +Y+GN+  +IN    + P       +   ++Y SY+A  + 
Sbjct: 2   SRQQNEEDTNSVLFDARNEYYIGNFMGSINF---VLPEQGTAGPELLSYMYLSYLAIDSG 58

Query: 171 RIVLQELKTADPI-LQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATI 347
           RIV  ++K  +   LQ L+ + +     +    ++  +  +VA G E    ++H+  A +
Sbjct: 59  RIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAIV 117

Query: 348 YYYEDNYEAALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
           Y ++  +E ALKI H    +E  A S+QCLL + R DLA++ +  +QE+
Sbjct: 118 YCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEI 166


>L42511-1|AAC41607.1|  224|Drosophila melanogaster shortsighted
           class 1 protein.
          Length = 224

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 25/101 (24%), Positives = 45/101 (44%)
 Frame = +3

Query: 192 KTADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
           K  DP+ + +   +DY  P A+  + VA ID ++ +  +L     H++ A     E   E
Sbjct: 28  KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKS--HLMIAVREEVEVLKE 84

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
              ++   I  +EL       +L  N P    ++L+L  +L
Sbjct: 85  RISELMDKINKLELE----NSILKSNIPQETLQQLQLQLQL 121


>AE014134-2215|AAF53200.2|  219|Drosophila melanogaster CG5461-PB,
           isoform B protein.
          Length = 219

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 25/101 (24%), Positives = 45/101 (44%)
 Frame = +3

Query: 192 KTADPILQPLKSLVDYLSPGANKPAIVADIDARVAKGTELSNEVFHVVAATIYYYEDNYE 371
           K  DP+ + +   +DY  P A+  + VA ID ++ +  +L     H++ A     E   E
Sbjct: 28  KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKS--HLMIAVREEVEVLKE 84

Query: 372 AALKIFHDIELVELRAYSIQCLLAMNRPDLARKELKLLQEL 494
              ++   I  +EL       +L  N P    ++L+L  +L
Sbjct: 85  RISELMDKINKLELE----NSILKSNIPQETLQQLQLQLQL 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,025,672
Number of Sequences: 53049
Number of extensions: 435583
Number of successful extensions: 1139
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)