Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B01
         (99 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    18   7.9  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    18   7.9  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    18   7.9  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory
          receptor candidate 62 protein.
          Length = 320

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFY 93
          +V+ +TP+K  R        ++V FY
Sbjct: 10 NVLAMTPTKEKRFPHRIHSYFMVAFY 35


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory
          receptor candidate 37 protein.
          Length = 331

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFY 93
          +V+ +TP+K  R        ++V FY
Sbjct: 10 NVLAMTPTKEKRFPHRIHSYFMVAFY 35


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 68  SEFVTSLSNLLGVKSTT 18
           +EF T + NLL  +S T
Sbjct: 170 NEFTTHVMNLLREQSRT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,788
Number of Sequences: 336
Number of extensions: 174
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 14
effective length of database: 117,881
effective search space used:  2121858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.4 bits)