Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_B01
         (99 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061349-1|AAL28897.1|  433|Drosophila melanogaster LD28038p pro...    47   3e-06
AE014134-2713|AAF53532.1|  433|Drosophila melanogaster CG5809-PA...    47   3e-06
AE013599-440|AAF59237.3|  927|Drosophila melanogaster CG2144-PA ...    27   4.6  

>AY061349-1|AAL28897.1|  433|Drosophila melanogaster LD28038p
           protein.
          Length = 433

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 17/28 (60%), Positives = 24/28 (85%)
 Frame = +1

Query: 16  DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
           DV++LT   FD+LV NSD++W+VEF+AP
Sbjct: 157 DVIELTEDNFDKLVLNSDDIWLVEFFAP 184



 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +1

Query: 10  SSDVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
           S  VV+LTPS FDR V   D +W+VEFYAP
Sbjct: 24  SDGVVELTPSNFDREVLKDDAIWVVEFYAP 53


>AE014134-2713|AAF53532.1|  433|Drosophila melanogaster CG5809-PA
           protein.
          Length = 433

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 17/28 (60%), Positives = 24/28 (85%)
 Frame = +1

Query: 16  DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
           DV++LT   FD+LV NSD++W+VEF+AP
Sbjct: 157 DVIELTEDNFDKLVLNSDDIWLVEFFAP 184



 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +1

Query: 10  SSDVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
           S  VV+LTPS FDR V   D +W+VEFYAP
Sbjct: 24  SDGVVELTPSNFDREVLKDDAIWVVEFYAP 53


>AE013599-440|AAF59237.3|  927|Drosophila melanogaster CG2144-PA
           protein.
          Length = 927

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 7   GSSDVVDLTPSKFDRLVTNSDEVWIVEFY 93
           G    V L PS+F R V N D  ++ +FY
Sbjct: 152 GDHTWVKLFPSEFTRQVENHDSFYVNDFY 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,064,387
Number of Sequences: 53049
Number of extensions: 35130
Number of successful extensions: 159
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 24,988,368
effective HSP length: 14
effective length of database: 24,245,682
effective search space used: 436422276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)