Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_B01
(99 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 44 1e-05
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 41 1e-04
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 33 0.027
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 33 0.027
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 30 0.19
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 29 0.58
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 29 0.58
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 29 0.58
Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical pr... 27 1.3
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 27 1.8
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 44.4 bits (100), Expect = 1e-05
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
DVV+LT + F V NSD++WIVEFYAP
Sbjct: 25 DVVELTEANFQSKVINSDDIWIVEFYAP 52
Score = 40.7 bits (91), Expect = 1e-04
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +1
Query: 13 SDVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
++VV+LT + F+ LV NS ++W+VEF+AP
Sbjct: 164 NEVVELTDANFEDLVLNSKDIWLVEFFAP 192
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 40.7 bits (91), Expect = 1e-04
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 19 VVDLTPSKFDRLVTNSDEVWIVEFYAP 99
VV LT S FD+LV NS E W+VEF+AP
Sbjct: 156 VVVLTDSNFDKLVLNSKEPWMVEFFAP 182
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 19 VVDLTPSKFDRLVTNSDEVWIVEFYAP 99
V +LT S FD V SD +WIVEFYAP
Sbjct: 26 VFELTDSNFDAKVLKSDRIWIVEFYAP 52
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 33.1 bits (72), Expect = 0.027
Identities = 12/29 (41%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Frame = +1
Query: 19 VVDLTPSKFDRLVTN--SDEVWIVEFYAP 99
V++++P +F+ LV N +E W+V+F+AP
Sbjct: 81 VMEMSPEQFEELVMNRKDEETWLVDFFAP 109
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 13 SDVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
++VV L + F V +S E WIV+F+AP
Sbjct: 200 TEVVSLG-NDFHTTVLDSSEPWIVDFFAP 227
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 33.1 bits (72), Expect = 0.027
Identities = 12/29 (41%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
Frame = +1
Query: 19 VVDLTPSKFDRLVTN--SDEVWIVEFYAP 99
V++++P +F+ LV N +E W+V+F+AP
Sbjct: 551 VMEMSPEQFEELVMNRKDEETWLVDFFAP 579
Score = 32.3 bits (70), Expect = 0.047
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFYA 96
++V L + F R+V++S+E+W + FY+
Sbjct: 117 EIVTLNRADFQRMVSDSNEIWFINFYS 143
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 13 SDVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
++VV L + F V +S E WIV+F+AP
Sbjct: 670 TEVVSLG-NDFHTTVLDSSEPWIVDFFAP 697
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 30.3 bits (65), Expect = 0.19
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
+VV LT FD ++N++ V +VEFYAP
Sbjct: 148 EVVTLTTENFDDFISNNELV-LVEFYAP 174
Score = 25.8 bits (54), Expect = 4.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 37 SKFDRLVTNSDEVWIVEFYAP 99
S FD++V + + ++EFYAP
Sbjct: 507 SNFDKIVNDESKDVLIEFYAP 527
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
+V+ LT FD ++ N +E +VEFYAP
Sbjct: 24 NVIVLTKDNFDEVI-NGNEFILVEFYAP 50
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
+V+ LT FD ++ N +E +VEFYAP
Sbjct: 24 NVIVLTKDNFDEVI-NGNEFILVEFYAP 50
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 16 DVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
+V+ LT FD ++ N +E +VEFYAP
Sbjct: 24 NVIVLTKDNFDEVI-NGNEFILVEFYAP 50
>Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical
protein F33H2.6 protein.
Length = 301
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 7 GSSDVVDLTPSKFDRLVTNSDEVW 78
G+ ++D P FD +V NSDE++
Sbjct: 53 GNGQLIDGKPKNFDLIVRNSDELY 76
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 13 SDVVDLTPSKFDRLVTNSDEVWIVEFYAP 99
++VV L + F V +S E WIV+F+AP
Sbjct: 110 TEVVSLG-NDFHTTVLDSSEPWIVDFFAP 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,059,418
Number of Sequences: 27780
Number of extensions: 16952
Number of successful extensions: 63
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 12,740,198
effective HSP length: 14
effective length of database: 12,351,278
effective search space used: 222323004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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