Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A19
(385 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068541-1|AAH68541.1| 713|Homo sapiens leucine rich repeat neu... 29 6.8
BC034047-1|AAH34047.1| 713|Homo sapiens leucine rich repeat neu... 29 6.8
U58996-1|AAC14353.1| 430|Homo sapiens testis calpastatin protein. 28 8.9
U38525-1|AAA80684.1| 284|Homo sapiens calpastatin protein. 28 8.9
U31346-1|AAB60372.1| 203|Homo sapiens calpastatin protein. 28 8.9
U31345-1|AAB60371.1| 464|Homo sapiens calpastatin protein. 28 8.9
U26724-1|AAC50136.2| 543|Homo sapiens calpastatin protein. 28 8.9
S73329-1|AAB32311.1| 186|Homo sapiens calpastatin protein. 28 8.9
D50827-1|BAA09438.1| 178|Homo sapiens calpastatin protein. 28 8.9
D16217-1|BAA03747.1| 708|Homo sapiens calpastatin protein. 28 8.9
BT009783-1|AAP88785.1| 667|Homo sapiens calpastatin protein. 28 8.9
BC078149-1|AAH78149.1| 592|Homo sapiens CAST protein protein. 28 8.9
BC013579-1|AAH13579.1| 667|Homo sapiens CAST protein protein. 28 8.9
AY189741-1|AAO34397.1| 435|Homo sapiens calpastatin protein. 28 8.9
AF327443-1|AAG48151.1| 590|Homo sapiens calpastatin protein. 28 8.9
AB208816-1|BAD92053.1| 784|Homo sapiens calpastatin isoform a v... 28 8.9
>BC068541-1|AAH68541.1| 713|Homo sapiens leucine rich repeat
neuronal 2 protein.
Length = 713
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 255 PRSQAHVLKMVSLLMLNNVTNTMHAKMARSLEKLCPDGM 371
PR+ H+ +M +L++ NN + +H + A SL L G+
Sbjct: 328 PRAFHHLPQMETLMLNNNALSALHQQTAESLPNLQEVGL 366
>BC034047-1|AAH34047.1| 713|Homo sapiens leucine rich repeat
neuronal 2 protein.
Length = 713
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 255 PRSQAHVLKMVSLLMLNNVTNTMHAKMARSLEKLCPDGM 371
PR+ H+ +M +L++ NN + +H + A SL L G+
Sbjct: 328 PRAFHHLPQMETLMLNNNALSALHQQTAESLPNLQEVGL 366
>U58996-1|AAC14353.1| 430|Homo sapiens testis calpastatin protein.
Length = 430
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 348 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 383
>U38525-1|AAA80684.1| 284|Homo sapiens calpastatin protein.
Length = 284
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 202 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 237
>U31346-1|AAB60372.1| 203|Homo sapiens calpastatin protein.
Length = 203
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 121 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 156
>U31345-1|AAB60371.1| 464|Homo sapiens calpastatin protein.
Length = 464
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 382 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 417
>U26724-1|AAC50136.2| 543|Homo sapiens calpastatin protein.
Length = 543
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 461 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 496
>S73329-1|AAB32311.1| 186|Homo sapiens calpastatin protein.
Length = 186
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 104 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 139
>D50827-1|BAA09438.1| 178|Homo sapiens calpastatin protein.
Length = 178
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 96 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 131
>D16217-1|BAA03747.1| 708|Homo sapiens calpastatin protein.
Length = 708
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 626 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 661
>BT009783-1|AAP88785.1| 667|Homo sapiens calpastatin protein.
Length = 667
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 585 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 620
>BC078149-1|AAH78149.1| 592|Homo sapiens CAST protein protein.
Length = 592
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 510 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 545
>BC013579-1|AAH13579.1| 667|Homo sapiens CAST protein protein.
Length = 667
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 585 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 620
>AY189741-1|AAO34397.1| 435|Homo sapiens calpastatin protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 377 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 412
>AF327443-1|AAG48151.1| 590|Homo sapiens calpastatin protein.
Length = 590
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 508 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 543
>AB208816-1|BAD92053.1| 784|Homo sapiens calpastatin isoform a
variant protein.
Length = 784
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 197 GKKKPANPPARVIEESEKDAEITSSCPEDGFFADAEQC 310
G+ KP PP + E+S+K A+ P D D + C
Sbjct: 702 GQDKPVKPPTKKSEDSKKPAD--DQDPIDALSGDLDSC 737
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,842,262
Number of Sequences: 237096
Number of extensions: 843104
Number of successful extensions: 1850
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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