Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A19
(385 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117199-3|CAB55043.3| 868|Caenorhabditis elegans Hypothetical ... 29 0.85
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 28 2.0
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 28 2.0
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 2.6
AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kin... 28 2.6
AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase p... 28 2.6
L15188-2|AAA27947.2| 648|Caenorhabditis elegans Polo kinase pro... 27 4.5
L15188-1|AAM22025.1| 649|Caenorhabditis elegans Polo kinase pro... 27 4.5
AF080581-1|AAC34661.1| 648|Caenorhabditis elegans polo-like kin... 27 4.5
AF057165-1|AAC14129.1| 649|Caenorhabditis elegans putative seri... 27 4.5
Z70268-1|CAA94217.1| 390|Caenorhabditis elegans Hypothetical pr... 27 6.0
U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase pro... 27 6.0
AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kin... 27 6.0
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 26 7.9
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 26 7.9
>AL117199-3|CAB55043.3| 868|Caenorhabditis elegans Hypothetical
protein Y43F11A.5 protein.
Length = 868
Score = 29.5 bits (63), Expect = 0.85
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 191 PRGKKKPANPPARVIEESEKDAEITSS 271
PR KP PP ++ +K AEITS+
Sbjct: 216 PRSMAKPPPPPQKITTTEQKTAEITSA 242
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 209 PANPPARVIEESEKDAEITSSC--PEDGFFADAEQCDKYYACQDG 337
P A +E + +T SC DGF++ E D Y AC +G
Sbjct: 193 PYTTGAPAADEPVTRSAVTKSCVGKADGFYSFGECSDHYTACSNG 237
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 209 PANPPARVIEESEKDAEITSSC--PEDGFFADAEQCDKYYACQDG 337
P A +E + +T SC DGF++ E D Y AC +G
Sbjct: 193 PYTTGAPAADEPVTRSAVTKSCVGKADGFYSFGECSDHYTACSNG 237
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 245 EKDAEITSSCPEDG-FFADAEQCDKYYAC 328
E + C E G F ADA C+ +Y C
Sbjct: 1236 ENHGQTNGECSEHGSFIADANNCEVFYRC 1264
>AF194964-1|AAF28314.1| 632|Caenorhabditis elegans polo-like kinase
2 protein.
Length = 632
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 361 GHSFSSDLAILACIVFVTLF 302
GHSF DL + CI+++ LF
Sbjct: 209 GHSFEVDLWAIGCILYILLF 228
>AC024201-9|AAF36014.1| 632|Caenorhabditis elegans Polo kinase
protein 2 protein.
Length = 632
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 361 GHSFSSDLAILACIVFVTLF 302
GHSF DL + CI+++ LF
Sbjct: 209 GHSFEVDLWAIGCILYILLF 228
>L15188-2|AAA27947.2| 648|Caenorhabditis elegans Polo kinase
protein 1, isoform a protein.
Length = 648
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 364 SGHSFSSDLAILACIVFVTLF 302
+GHSF D+ + CI+++ LF
Sbjct: 210 AGHSFEVDIWAVGCILYILLF 230
>L15188-1|AAM22025.1| 649|Caenorhabditis elegans Polo kinase
protein 1, isoform b protein.
Length = 649
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 364 SGHSFSSDLAILACIVFVTLF 302
+GHSF D+ + CI+++ LF
Sbjct: 211 AGHSFEVDIWAVGCILYILLF 231
>AF080581-1|AAC34661.1| 648|Caenorhabditis elegans polo-like
kinase-1 protein.
Length = 648
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 364 SGHSFSSDLAILACIVFVTLF 302
+GHSF D+ + CI+++ LF
Sbjct: 210 AGHSFEVDIWAVGCILYILLF 230
>AF057165-1|AAC14129.1| 649|Caenorhabditis elegans putative
serine/threonine proteinkinase protein.
Length = 649
Score = 27.1 bits (57), Expect = 4.5
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 364 SGHSFSSDLAILACIVFVTLF 302
+GHSF D+ + CI+++ LF
Sbjct: 211 AGHSFEVDIWAVGCILYILLF 231
>Z70268-1|CAA94217.1| 390|Caenorhabditis elegans Hypothetical
protein T21E8.4 protein.
Length = 390
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 180 HQPSREERRSPLIHQRELLKRVKRTP 257
HQ +R+ RRS + Q+E +R+ P
Sbjct: 116 HQENRDRRRSEVRQQKEYFRRIDAPP 141
>U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase
protein 3 protein.
Length = 615
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 364 SGHSFSSDLAILACIVFVTLF 302
+GH+F D+ + CI++V LF
Sbjct: 207 TGHAFEVDIWAIGCILYVLLF 227
>AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kinase
protein.
Length = 615
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 364 SGHSFSSDLAILACIVFVTLF 302
+GH+F D+ + CI++V LF
Sbjct: 207 TGHAFEVDIWAIGCILYVLLF 227
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical
protein K08H10.7 protein.
Length = 1020
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 177 YHQPSREERRSPLIHQRELLKRVKRTPRS-QAHVLKMVSLL 296
+ +P R + R L+ Q + LKR R P + + LKM+ L
Sbjct: 419 HEKPQRYKNRIDLVMQDKFLKRATRKPHDYKENTLKMLKEL 459
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 177 YHQPSREERRSPLIHQRELLKRVKRTPRS-QAHVLKMVSLL 296
+ +P R + R L+ Q + LKR R P + + LKM+ L
Sbjct: 419 HEKPQRYKNRIDLVMQDKFLKRATRKPHDYKENTLKMLKEL 459
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,764,111
Number of Sequences: 27780
Number of extensions: 128498
Number of successful extensions: 410
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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