Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_A18
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         25   1.6  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         25   1.6  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         25   1.6  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         25   1.6  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   1.6  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   2.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.3  

>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 184 NAVDVFNYLNIKTVQTEKACDDVVAELRRRSIEHQALGFDCEWVTENGRRKPVAL 348
           +AVD    L     Q EKA  +    L++ +  +Q L      V E+ RR   AL
Sbjct: 209 DAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEAL 263


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 184 NAVDVFNYLNIKTVQTEKACDDVVAELRRRSIEHQALGFDCEWVTENGRRKPVAL 348
           +AVD    L     Q EKA  +    L++ +  +Q L      V E+ RR   AL
Sbjct: 209 DAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEAL 263


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 184 NAVDVFNYLNIKTVQTEKACDDVVAELRRRSIEHQALGFDCEWVTENGRRKPVAL 348
           +AVD    L     Q EKA  +    L++ +  +Q L      V E+ RR   AL
Sbjct: 209 DAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEAL 263


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 184 NAVDVFNYLNIKTVQTEKACDDVVAELRRRSIEHQALGFDCEWVTENGRRKPVAL 348
           +AVD    L     Q EKA  +    L++ +  +Q L      V E+ RR   AL
Sbjct: 209 DAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEAL 263


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +1

Query: 184  NAVDVFNYLNIKTVQTEKACDDVVAELRRRSIEHQALGFDCEWVTENGRRKPVAL 348
            +AVD    L     Q EKA  +    L++ +  +Q L      V E+ RR   AL
Sbjct: 1348 DAVDALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEAL 1402


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 165 FSHKICYTRTTNCHSGCCKVNLI 97
           F   I + R+ +CHS  C V+ +
Sbjct: 12  FCRDIVWLRSCSCHSSVCAVSFV 34


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 127  PQRLL*SKSYIYHLFP*HEYIYQRLKRGQRYYQQVLFHKILV 2
            P  L+ S S ++  F   E I +  K+G +     +FH I+V
Sbjct: 886  PANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNIIV 927


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 127  PQRLL*SKSYIYHLFP*HEYIYQRLKRGQRYYQQVLFHKILV 2
            P  L+ S S ++  F   E I +  K+G +     +FH I+V
Sbjct: 887  PANLIKSSSSLFDRFDHPEEIMRDFKKGVQMDALQMFHNIIV 928


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 395 ASLNSPQRPSREDSCTKATGLRLPFSVTHSQSNPRA 288
           +S +SP   S   + +  +G R+ + + H Q  P A
Sbjct: 204 SSASSPNLSSNGSTLSSPSGSRMEYLLPHQQHPPGA 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,679
Number of Sequences: 2352
Number of extensions: 10301
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)