Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_A16
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   0.80 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.9  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 587 QLWQHQYFHTHH*IS*RNHFQSSNSISYHRPTDSLRAS 474
           Q  QHQ+ H HH     +H Q+ N    +  TD+++ S
Sbjct: 649 QQQQHQHHHHHH----HHHHQNPNDHFVNTNTDTIKRS 682


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 377  RIENYLSKGPHSTISLDLKSIFNNINILNV 466
            R+E Y+S G +STI +D   +F     LNV
Sbjct: 1436 RLEVYISSGSNSTIDVDHLRVFPAQLDLNV 1465


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 377  RIENYLSKGPHSTISLDLKSIFNNINILNV 466
            R+E Y+S G +STI +D   +F     LNV
Sbjct: 1437 RLEVYISSGSNSTIDVDHLRVFPAQLDLNV 1466


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = -1

Query: 440 KLILNRAK*SNVDLYSSNSRFVATDRRLEVLESADVNHQAMFYLQTSG 297
           ++ L R   +  D Y  N + V     + +LESA  ++   +Y+   G
Sbjct: 95  EIYLRRVIGAKKDQYFLNKKVVPRSEVVNLLESAGFSNSNPYYIVKQG 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,311
Number of Sequences: 2352
Number of extensions: 11710
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)