Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A16
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 81 6e-16
Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 29 1.9
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 29 3.3
AC006730-2|AAK72091.1| 322|Caenorhabditis elegans Serpentine re... 29 3.3
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 28 4.4
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical... 28 5.8
U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical p... 27 7.7
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical protein
F55D10.1 protein.
Length = 955
Score = 81.0 bits (191), Expect = 6e-16
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Frame = +2
Query: 5 EVTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNETVL-GQPLVAIGTHVIIQ 181
+ +V+TDRA G + +G +++M+HRR +DD FGV EAL+E G LVA+G H+++
Sbjct: 757 QFSVITDRAQGMVAS-DGVVEIMLHRRCFYDDHFGVEEALDEPGKDGAGLVAMGKHIVLF 815
Query: 182 TK-NDITIEKTKLELHNRPAVFVSDAKEIMLENWLKMNNYQTFASKTLPDGLHLLTLEP- 355
T T + L + N ++ K + ++ Y + LP G+HLLTLE
Sbjct: 816 TDVKASTSQLRPLAIDNFHQPVLAFNKNPEKFEFNRLLEYSGLKFE-LPIGIHLLTLEKW 874
Query: 356 RGDDLLLRIEN-YLSKGPHSTISLDLKSIFNNINILNVKETMLAANQWAGDKRWSWKTEN 532
L+R EN Y + +S D IF N +I++ KE +L AN+ G + S +
Sbjct: 875 HKKSSLIRFENIYHGEEGNSIKEFDPTHIFTNFDIVSFKELLLGANRVVGKNKESGSSFR 934
Query: 533 DFVK 544
F K
Sbjct: 935 SFEK 938
>Z83102-6|CAB05461.1| 417|Caenorhabditis elegans Hypothetical
protein C54C8.7 protein.
Length = 417
Score = 32.3 bits (70), Expect = 0.27
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 89 LHDDAFGVGEALNETVLGQPLVAIGTHVIIQTKNDITIEKTKLELHNRPAVFVSDAKEIM 268
L DD G + N G PLVA+G V T+ +T + E ++ FV +
Sbjct: 99 LWDDESGSARSYNNFSSGFPLVALGQCVYYSTQGALTGKWLSAECESQRMAFVCELPTTF 158
Query: 269 LENWL-KMNNY-QTFAS 313
+N L N Y TF+S
Sbjct: 159 ADNCLHNYNGYCYTFSS 175
>Z81030-1|CAB02703.1| 1204|Caenorhabditis elegans Hypothetical
protein C01G10.1 protein.
Length = 1204
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 564 PYASLNLLTKSFSVFQLHLLSPAH*FAASIVSF--TFNIFILLKIDFKSSEIVECGPLL 394
P+ N+ +S + H L H + ++ S +++ F L +DF+SSE+ + GP+L
Sbjct: 315 PWFRRNIAKESKTKDLNHALKIFHDISEAVTSLDTSWHNFTALTLDFESSEVAKAGPIL 373
>Z92786-2|CAB07211.1| 518|Caenorhabditis elegans Hypothetical
protein F47H4.4 protein.
Length = 518
Score = 29.9 bits (64), Expect = 1.4
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Frame = +2
Query: 110 VGEALNETVLGQPLVAIGTHVIIQ---TKNDITIEKTKLELHNRPAVFVSDAKEIMLEN- 277
VGE +N+ L + L+ ++ K +I +EK L+++N +V D KE++ +N
Sbjct: 233 VGEIMNKLKLEEKLLMRKVSKSLRGFMDKLNIGVEKISLKIYNTTSVLQFDEKEVIYQNR 292
Query: 278 ----WLKMNNYQTF--ASKTLPDGLHLLTLEPRGDDLLLRIENY---LSKGPHSTISLDL 430
+ +N + K LH ++ + L L+ + + G H + +
Sbjct: 293 KDNCKVLYDNQEKLVKGGKYAIMALHDWSMVMKNQKLKLKELQFTLDVDLGDHQKLYKTI 352
Query: 431 KSIFNNINILNVKETML 481
K++ N + LNV++ L
Sbjct: 353 KTVLENSSYLNVEKITL 369
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical protein
F58H1.1b protein.
Length = 1145
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 8 VTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNE 130
+++ + +A G +SL G+I++M+ RRL DD G+ + + +
Sbjct: 936 MSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQQGVRD 976
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical protein
F58H1.1a protein.
Length = 1143
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 8 VTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGVGEALNE 130
+++ + +A G +SL G+I++M+ RRL DD G+ + + +
Sbjct: 934 MSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQQGVRD 974
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 158 IGTHVIIQTKNDITIEKTKLELHNRPAVFVSDAKEIMLENWLKMNNYQTFASK 316
IG H+I+ D+ +K HN + VS + I K+N+Y+ K
Sbjct: 258 IGPHIIVTPSEDLLWKKCDFVFHNNRFLIVSPTELIEFLFEFKINHYKITGKK 310
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/79 (26%), Positives = 29/79 (36%)
Frame = +2
Query: 83 RLLHDDAFGVGEALNETVLGQPLVAIGTHVIIQTKNDITIEKTKLELHNRPAVFVSDAKE 262
+ L DD+ G E N G PLV IG V T+ + + + P FV +
Sbjct: 94 KCLWDDSTGSAEMYNSFASGFPLVDIGKCVYYSTQGSLAGKWLNGNCESDPRAFVCELPA 153
Query: 263 IMLENWLKMNNYQTFASKT 319
+N N F T
Sbjct: 154 THADNCTYNYNGHCFTLHT 172
>AC006730-2|AAK72091.1| 322|Caenorhabditis elegans Serpentine
receptor, class i protein34 protein.
Length = 322
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 489 FAASIVSFTFNIFILLKIDFKSSEIVECGPLLK*FSI 379
+ VSF N+ ++L I FKS +IVE +L F I
Sbjct: 16 YIVGAVSFVLNVLVILIIIFKSYKIVEFQYMLLAFQI 52
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 138 STVSFNASPTPNASSWSN--LLCTISWISPSTKDAPPAARSVNTVTS 4
S+ S ++ +P SSWSN LL S + P T PP R+ + S
Sbjct: 544 SSASNLSTASPATSSWSNTDLLGGFSPMKPQTTSTPPNTRNPSASNS 590
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 138 STVSFNASPTPNASSWSN--LLCTISWISPSTKDAPPAARSVNTVTS 4
S+ S ++ +P SSWSN LL S + P T PP R+ + S
Sbjct: 544 SSASNLSTASPATSSWSNTDLLGGFSPMKPQTTSTPPNTRNPSASNS 590
>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
protein Y53F4B.21 protein.
Length = 1099
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 438 IDFKSSEIVECGPLLK*FSIRSNRSSPRGSRVSRCKPS--GNVL 313
+ F S E V C L + +N+SSP G + S+ K S NVL
Sbjct: 825 LSFLSEETVRCQVLKYLHEMEANKSSPDGKKKSQYKASWAANVL 868
>U41264-11|AAA82431.2| 550|Caenorhabditis elegans Hypothetical
protein F10E7.1 protein.
Length = 550
Score = 27.5 bits (58), Expect = 7.7
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 239 VFVSDAKEIMLENWLKMNNYQTFASKTLPDGLHLLTLEPRGDDLLLRIENYLSKGPHSTI 418
+ +S+ K ++ + +NN + F T+P+ HL T E GD + + +SK +
Sbjct: 308 IIISNWKVKTVKLIITINNMEEFI--TIPEQFHLFTKERLGDPI---STHPISKNSLEKV 362
Query: 419 SLDLKSIFNNI 451
LDL+ N +
Sbjct: 363 ELDLRFGVNTL 373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,562,346
Number of Sequences: 27780
Number of extensions: 251513
Number of successful extensions: 712
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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