Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A15
(480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 268 2e-72
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 264 3e-71
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 250 6e-67
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 162 1e-40
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 131 3e-31
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 128 2e-30
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 128 2e-30
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 127 5e-30
03_01_0034 + 318432-318825,318902-319851 126 1e-29
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 125 2e-29
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 124 4e-29
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 122 2e-28
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 97 9e-21
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.49
09_06_0049 + 20486178-20486358,20486545-20486717,20487608-204876... 29 2.0
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.0
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 29 2.0
09_01_0184 + 2693576-2693578,2694157-2694952,2695169-2695249,269... 28 3.4
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 4.5
10_07_0124 - 13085820-13085997,13086235-13086362,13086475-130865... 27 6.0
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 6.0
08_02_1356 - 26348953-26350062 27 7.9
08_02_1296 - 25951758-25951983,25952134-25952159,25952626-259527... 27 7.9
08_02_1004 - 23461798-23462024,23462340-23462415,23463479-234636... 27 7.9
06_03_0020 + 15515768-15517696 27 7.9
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 27 7.9
01_06_0662 + 30987187-30987277,30987825-30990214 27 7.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 268 bits (656), Expect = 2e-72
Identities = 117/132 (88%), Positives = 127/132 (96%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRECIS+HIGQAG+Q+G+ACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIG EIVD+ LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 RIRKLADQCTGL 480
RIRKLAD CTGL
Sbjct: 121 RIRKLADNCTGL 132
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 264 bits (647), Expect = 3e-71
Identities = 115/132 (87%), Positives = 126/132 (95%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRECIS+HIGQAG+Q+G+ACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIG EIVD+ LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 RIRKLADQCTGL 480
RIRKLAD CTGL
Sbjct: 121 RIRKLADNCTGL 132
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 250 bits (611), Expect = 6e-67
Identities = 107/132 (81%), Positives = 123/132 (93%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+HIGQAG+Q+G+ACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G EIVD+ LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 445 RIRKLADQCTGL 480
R+RKLAD CTGL
Sbjct: 121 RVRKLADNCTGL 132
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 162 bits (394), Expect = 1e-40
Identities = 72/95 (75%), Positives = 84/95 (88%)
Frame = +1
Query: 196 TDKTLGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 375
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 376 DAANNYARGHYTIGNEIVDVVLDRIRKLADQCTGL 480
DAANN+ARGHYT+G E+VD+ LDR+RKLAD CTGL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGL 192
Score = 79.8 bits (188), Expect = 1e-15
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTD 201
MRE IS+HIGQAG+Q+G++CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 131 bits (316), Expect = 3e-31
Identities = 61/130 (46%), Positives = 82/130 (63%)
Frame = +1
Query: 82 KMRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAG 261
KMRE + + GQ G QIGS WE+ C EHGI P G+ L + N +++E G
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCG 237
Query: 262 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVL 441
+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 238 RFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 297
Query: 442 DRIRKLADQC 471
D +RK A+ C
Sbjct: 298 DVVRKEAENC 307
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 128 bits (310), Expect = 2e-30
Identities = 59/129 (45%), Positives = 82/129 (63%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHGI P G+ + L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 128 bits (310), Expect = 2e-30
Identities = 60/129 (46%), Positives = 81/129 (62%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIGS WE+ C EHGI P G+ L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQL--ERVNVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 127 bits (306), Expect = 5e-30
Identities = 58/129 (44%), Positives = 82/129 (63%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 126 bits (303), Expect = 1e-29
Identities = 57/129 (44%), Positives = 80/129 (62%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 125 bits (302), Expect = 2e-29
Identities = 56/129 (43%), Positives = 82/129 (63%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHG+ G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 124 bits (299), Expect = 4e-29
Identities = 57/129 (44%), Positives = 81/129 (62%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHGI G+ D L + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 122 bits (293), Expect = 2e-28
Identities = 56/129 (43%), Positives = 79/129 (61%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAENC 127
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 96.7 bits (230), Expect = 9e-21
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 2/128 (1%)
Frame = +1
Query: 88 RECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKH 267
RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 268 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGNEIVDVVL 441
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G ++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 442 DRIRKLAD 465
D I + AD
Sbjct: 120 DMIDREAD 127
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 224 SSPPPSVLSVGICPSGWIPCSRQYSSQ 144
S P P LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>09_06_0049 +
20486178-20486358,20486545-20486717,20487608-20487683,
20489377-20489465
Length = 172
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = -1
Query: 339 LPVCSGTNLINDSRFEVDKHSPRHVFTSTGLTKECIEGVITAAQRLVRGHLSIRLD 172
LP C G L+ DSR V+K SP + + KE E I LV+ H R D
Sbjct: 111 LPYCQGLELLVDSRL-VEKKSPNNEPATASYRKE--EMNIEQQSALVQRHEEERFD 163
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 218 PPPSVLSVGICPSGWIPCSR 159
P P LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 221 SPPPSVLSVGICPSGWIPCSRQYSSQ 144
+P P LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>09_01_0184 +
2693576-2693578,2694157-2694952,2695169-2695249,
2695454-2695793,2695799-2696258,2696404-2696526,
2696532-2697266
Length = 845
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 194 PRTRRWAAVMTPSIHSLVRPVLVNTCLGLCLSTSNLLSLMRFVPE 328
P TR A + ++SLV + N C L ++ L+RF PE
Sbjct: 726 PITRSRARKILEEVNSLVAQLNPNFCENFILPKCSIFVLLRFTPE 770
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 212 PSVLSVGICPSGWIPCSRQYSSQ 144
P LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>10_07_0124 -
13085820-13085997,13086235-13086362,13086475-13086550,
13086726-13086803,13086985-13087064,13087411-13087480,
13087730-13087887,13088225-13088315,13088379-13088455,
13088612-13088686,13088798-13089071,13089911-13090041,
13090154-13090323,13090413-13090971,13091077-13091127
Length = 731
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 233 IHSLVRPVLVNTCLGLCLSTSNLLSLMRFVPEHTGNCST 349
+++LV +LV C G C+S + L + +H G ++
Sbjct: 351 MNALVEAILVKPCAGFCISHEVAVFLRNYFFKHDGTITS 389
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 181 DGQMPTDKTLGGGDDSFNTFFSETGAGKHVPR 276
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>08_02_1356 - 26348953-26350062
Length = 369
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 173 SSLMDRCPRTRRWAAVMTP 229
S++ CP TRRWAA+ P
Sbjct: 105 SAMYVACPATRRWAALPVP 123
>08_02_1296 -
25951758-25951983,25952134-25952159,25952626-25952710,
25952828-25952959,25953037-25953180,25953254-25953312,
25953381-25953687,25954211-25954292,25954369-25954502,
25954587-25954680,25954751-25954874,25955136-25955195
Length = 490
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 163 EHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKHVPRAVFVDL-EPTVVDEVRTGTYRQ 339
+H P P + TL +++ N + + +D P + + ++ T Q
Sbjct: 292 QHPTTPPSLQPPETTLD--NNTVNQIIPSAKRALQFEKELHIDQPSPAIANTIQVAT-NQ 348
Query: 340 LFHPEQLITGKE 375
L+HP+Q+ KE
Sbjct: 349 LYHPQQVDLSKE 360
>08_02_1004 -
23461798-23462024,23462340-23462415,23463479-23463610,
23463927-23464004,23464919-23465320
Length = 304
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -2
Query: 269 TCLPAP--VSLKNVLKESSPPPSVLSVGICPSG 177
TCLP P ++ VL PPP S + P+G
Sbjct: 3 TCLPPPPRAAIAAVLTSLLPPPPGASASLAPAG 35
>06_03_0020 + 15515768-15517696
Length = 642
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +1
Query: 10 HCEPATPHALHITTAFCKLSSTYTKMRECISV--HIGQAGVQIGSACWELY---CLEHGI 174
H +P T H L + AF +L + + +R+ +++ + AG+ C+ HG
Sbjct: 26 HSDPHTAHPLLV--AFSRLCA-HGPLRDALALLPDLAAAGLTADPVAVSRLIKLCVRHGT 82
Query: 175 QPDGQMPTDKTLGGGD 222
DG++ GGGD
Sbjct: 83 PSDGRLIHRHVFGGGD 98
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/67 (29%), Positives = 25/67 (37%)
Frame = +1
Query: 94 CISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKHVP 273
CI + + IG+ C C G DK GDD +ET HVP
Sbjct: 2740 CIEISVDGKFALIGT-CLSNSCNRDGFSAIDDYELDKP--NGDDDLPEL-NETKPSVHVP 2795
Query: 274 RAVFVDL 294
F+DL
Sbjct: 2796 SVCFIDL 2802
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 240 ECIEGVITAAQRLVRGHLSIRLDTMLEAVQLPAC*ADLNSGLPDVY 103
+CIEGV + ++R L R+ +L ++ C +L G + Y
Sbjct: 130 DCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAY 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,103,270
Number of Sequences: 37544
Number of extensions: 351240
Number of successful extensions: 1167
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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