Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A15
(480 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 259 7e-70
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 259 7e-70
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 259 7e-70
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 257 3e-69
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 234 3e-62
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 234 3e-62
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 233 6e-62
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 233 6e-62
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 232 9e-62
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 231 1e-61
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 228 2e-60
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 228 2e-60
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 215 1e-56
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 215 2e-56
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 194 4e-50
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 172 1e-43
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 131 3e-31
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 130 4e-31
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 129 1e-30
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 129 1e-30
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 126 8e-30
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 110 4e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 110 4e-25
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 68 4e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 68 4e-12
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 31 0.33
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 30 1.00
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 30 1.00
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 30 1.00
U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical pr... 29 1.7
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 29 2.3
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 29 2.3
Z47356-6|CAA87419.1| 554|Caenorhabditis elegans Hypothetical pr... 28 4.0
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 27 5.3
U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone... 27 7.0
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 27 7.0
AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear recep... 27 7.0
AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear recep... 27 7.0
AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like ... 27 9.3
AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical ... 27 9.3
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 259 bits (635), Expect = 7e-70
Identities = 113/132 (85%), Positives = 125/132 (94%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+HIGQAGVQIG+ACWELYCLEHGIQPDGQMP+DK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIG EI+D+ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 445 RIRKLADQCTGL 480
RIR+LAD CTGL
Sbjct: 121 RIRRLADNCTGL 132
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 259 bits (635), Expect = 7e-70
Identities = 113/132 (85%), Positives = 125/132 (94%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+HIGQAGVQIG+ACWELYCLEHGIQPDGQMP+DK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIG EI+D+ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 445 RIRKLADQCTGL 480
RIR+LAD CTGL
Sbjct: 121 RIRRLADNCTGL 132
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 259 bits (635), Expect = 7e-70
Identities = 113/132 (85%), Positives = 125/132 (94%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+HIGQAGVQIG+ACWELYCLEHGIQPDGQMP+DK+LGG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIG EI+D+ LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 445 RIRKLADQCTGL 480
RIR+LAD CTGL
Sbjct: 121 RIRRLADNCTGL 132
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 257 bits (630), Expect = 3e-69
Identities = 112/131 (85%), Positives = 124/131 (94%)
Frame = +1
Query: 88 RECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKH 267
RE IS+HIGQAGVQIG+ACWELYCLEHGIQPDGQMP+DK+LGG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 268 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLDR 447
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIG EI+D+ LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 448 IRKLADQCTGL 480
IR+LAD CTGL
Sbjct: 121 IRRLADNCTGL 131
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 234 bits (572), Expect = 3e-62
Identities = 101/132 (76%), Positives = 120/132 (90%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+G E++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 445 RIRKLADQCTGL 480
RIR+LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 234 bits (572), Expect = 3e-62
Identities = 101/132 (76%), Positives = 120/132 (90%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+G E++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 445 RIRKLADQCTGL 480
RIR+LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 233 bits (569), Expect = 6e-62
Identities = 100/132 (75%), Positives = 120/132 (90%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+G E++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 445 RIRKLADQCTGL 480
RIR+LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 233 bits (569), Expect = 6e-62
Identities = 100/132 (75%), Positives = 120/132 (90%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+G E++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 445 RIRKLADQCTGL 480
RIR+LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 232 bits (568), Expect = 9e-62
Identities = 100/132 (75%), Positives = 117/132 (88%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE +S+HIGQAGVQIG+ACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIG E++DVV+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 445 RIRKLADQCTGL 480
R+R+L ++C L
Sbjct: 121 RVRRLTERCQSL 132
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 231 bits (566), Expect = 1e-61
Identities = 99/133 (74%), Positives = 117/133 (87%)
Frame = +1
Query: 82 KMRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAG 261
+ RE IS+H+GQAGVQ+G+ACWELYCLEHGIQPDG + + +LG DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 262 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVL 441
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIG EI+DVV+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 442 DRIRKLADQCTGL 480
DR+R+L + C GL
Sbjct: 125 DRVRRLVENCRGL 137
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 228 bits (557), Expect = 2e-60
Identities = 98/132 (74%), Positives = 118/132 (89%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+G E++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 445 RIRKLADQCTGL 480
RIR+LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 228 bits (557), Expect = 2e-60
Identities = 98/132 (74%), Positives = 118/132 (89%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+G E++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 445 RIRKLADQCTGL 480
RIR+LAD C+GL
Sbjct: 119 RIRRLADNCSGL 130
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 215 bits (525), Expect = 1e-56
Identities = 94/135 (69%), Positives = 111/135 (82%)
Frame = +1
Query: 76 YTKMRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETG 255
Y RE IS+H+GQAGVQIG+ACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 4 YKGSREVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA 63
Query: 256 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDV 435
GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG E++DV
Sbjct: 64 GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDV 123
Query: 436 VLDRIRKLADQCTGL 480
V+DR+++LA+ C GL
Sbjct: 124 VMDRVKRLAENCNGL 138
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 215 bits (524), Expect = 2e-56
Identities = 94/132 (71%), Positives = 110/132 (83%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE IS+H+GQAGVQIG+ACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+G EI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 445 RIRKLADQCTGL 480
RIR+LA+ C GL
Sbjct: 118 RIRRLANNCEGL 129
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 194 bits (472), Expect = 4e-50
Identities = 84/131 (64%), Positives = 102/131 (77%)
Frame = +1
Query: 88 RECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKH 267
REC+S+HIGQAG QIG+ACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 268 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLDR 447
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIG E++DVVLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 448 IRKLADQCTGL 480
IRK + C GL
Sbjct: 125 IRKQTENCEGL 135
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 172 bits (419), Expect = 1e-43
Identities = 75/110 (68%), Positives = 90/110 (81%)
Frame = +1
Query: 151 LYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 330
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 331 YRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLDRIRKLADQCTGL 480
YR LFHPEQL++GKEDAAN YARG YTIG E++DVV+DR+++LA+ C GL
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGL 110
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 132 bits (318), Expect = 2e-31
Identities = 63/129 (48%), Positives = 83/129 (64%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + V GQ G QIG+ WE+ EHGIQPDG + L + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAEGC 127
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 131 bits (316), Expect = 3e-31
Identities = 64/129 (49%), Positives = 83/129 (64%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + V GQ G QIGS WE+ EHGIQPDG + L + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 445 RIRKLADQC 471
IRK A+ C
Sbjct: 119 VIRKEAEGC 127
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 130 bits (315), Expect = 4e-31
Identities = 64/129 (49%), Positives = 83/129 (64%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + V GQ G QIGS WE+ EHGIQPDG + L + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 445 RIRKLADQC 471
IRK A+ C
Sbjct: 119 VIRKEAEGC 127
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 129 bits (311), Expect = 1e-30
Identities = 62/127 (48%), Positives = 82/127 (64%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIGS WE+ EHGI P GQ D L + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 445 RIRKLAD 465
+RK A+
Sbjct: 119 VVRKEAE 125
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 129 bits (311), Expect = 1e-30
Identities = 62/127 (48%), Positives = 82/127 (64%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIGS WE+ EHGI P GQ D L + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 445 RIRKLAD 465
+RK A+
Sbjct: 119 VVRKEAE 125
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 126 bits (304), Expect = 8e-30
Identities = 60/129 (46%), Positives = 79/129 (61%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
MRE + + GQ G QIG+ WE+ EHGI P G D L + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 445 RIRKLADQC 471
+RK A+ C
Sbjct: 119 VVRKEAESC 127
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 110 bits (265), Expect = 4e-25
Identities = 55/132 (41%), Positives = 79/132 (59%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
M+E I+V +GQ G QIG+ WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 445 RIRKLADQCTGL 480
IR+ A+ L
Sbjct: 119 VIRREAEAADSL 130
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 110 bits (265), Expect = 4e-25
Identities = 55/132 (41%), Positives = 79/132 (59%)
Frame = +1
Query: 85 MRECISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGK 264
M+E I+V +GQ G QIG+ WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 265 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGNEIVDVVLD 444
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 445 RIRKLADQCTGL 480
IR+ A+ L
Sbjct: 119 VIRREAEAADSL 130
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 67.7 bits (158), Expect = 4e-12
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +1
Query: 97 ISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKHVPR 276
++VH+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 277 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGNEIVDVVLDR 447
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 448 IRKLADQCTGL 480
I + A+ L
Sbjct: 124 IIREAENTNNL 134
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 67.7 bits (158), Expect = 4e-12
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +1
Query: 97 ISVHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGGDDSFNTFFSETGAGKHVPR 276
++VH+GQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 277 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGNEIVDVVLDR 447
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 448 IRKLADQCTGL 480
I + A+ L
Sbjct: 124 IIREAENTNNL 134
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 31.5 bits (68), Expect = 0.33
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +2
Query: 38 SILRQPFVNYLQHIPK*GNASQYTSGKPEFRSAQHAGSCTASSMVSSLMDRCPRTRRWAA 217
+I + P V LQH+PK K EF +A G T + +++ +T + A
Sbjct: 343 AIGKTPLVK-LQHVPKAHGVRCNVYVKCEFLNA---GGSTKDRIAKKMVEIAEKTGKPGA 398
Query: 218 VMTPSIHSLVRPVLVNTCLGLCL 286
+TP +L+ P NT +GL L
Sbjct: 399 -LTPGATTLIEPTSGNTGIGLSL 420
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.9 bits (64), Expect = 1.00
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 52 AFCKLSSTYTKMRECIS----VHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGG 219
AF + + TK +CI+ ++ + QI +C CL +G++P G P + G
Sbjct: 34 AFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKPGGVQPKKPNIETG 93
Query: 220 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 315
FF+++G ++ F ++ P DE
Sbjct: 94 ----RAFFTKSGLKRN---KKFANVSPQTADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.9 bits (64), Expect = 1.00
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 52 AFCKLSSTYTKMRECIS----VHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGG 219
AF + + TK +CI+ ++ + QI +C CL +G++P G P + G
Sbjct: 52 AFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKPGGVQPKKPNIETG 111
Query: 220 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 315
FF+++G ++ F ++ P DE
Sbjct: 112 ----RAFFTKSGLKRN---KKFANVSPQTADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.9 bits (64), Expect = 1.00
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Frame = +1
Query: 52 AFCKLSSTYTKMRECIS----VHIGQAGVQIGSACWELYCLEHGIQPDGQMPTDKTLGGG 219
AF + + TK +CI+ ++ + QI +C CL +G++P G P + G
Sbjct: 34 AFFRRTVALTKSFKCITGRDDCNVHYSMHQICRSCRHKKCLSNGMKPGGVQPKKPNIETG 93
Query: 220 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE 315
FF+++G ++ F ++ P DE
Sbjct: 94 ----RAFFTKSGLKRN---KKFANVSPQTADE 118
>U55376-5|AAA98007.1| 501|Caenorhabditis elegans Hypothetical
protein F16H11.1 protein.
Length = 501
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 146 GSCTASSMVSSLMDRCPRTRRWAAVMTPSIHSLVRPVLVNTCLGLCLS-TSNLLSLMRFV 322
G + S+++ + D+ R W + T + SL P++ N C LC S TS L ++ FV
Sbjct: 92 GIFSDSNILPACFDKIGRRMSWHLIGTVLV-SLSFPMIFNKCF-LCKSTTSEWLKVLWFV 149
Query: 323 P 325
P
Sbjct: 150 P 150
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = -2
Query: 254 PVSLKNVLKESSPPPSVLSVGICPSGWIPCSRQYSSQHAEPI*TPACPMCTEMHSLILVY 75
P++ +V K S PPS + S W+P ++ + + + P+ + ++ +L L+
Sbjct: 99 PMASNSVQKLVSSPPSKSGPVLLSSSWLPLNKDIEVEVVDYL--PSSSVAPDLFALTLLR 156
Query: 74 VEDNLQK 54
+ D+ K
Sbjct: 157 INDSSMK 163
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = -2
Query: 254 PVSLKNVLKESSPPPSVLSVGICPSGWIPCSRQYSSQHAEPI*TPACPMCTEMHSLILVY 75
P++ +V K S PPS + S W+P ++ + + + P+ + ++ +L L+
Sbjct: 99 PMASNSVQKLVSSPPSKSGPVLLSSSWLPLNKDIEVEVVDYL--PSSSVAPDLFALTLLR 156
Query: 74 VEDNLQK 54
+ D+ K
Sbjct: 157 INDSSMK 163
>Z47356-6|CAA87419.1| 554|Caenorhabditis elegans Hypothetical
protein T15H9.6 protein.
Length = 554
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = -2
Query: 176 WIPCSRQYSSQHAEPI*TPACPMCTEMHSL---ILVYVEDNLQKAVVI 42
W P H PI TPA P H++ + ++D ++KA++I
Sbjct: 298 WDPRRNHADRYHLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALII 345
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = -2
Query: 218 PPPSVLSVGICPSGWI----PCSRQ-YSSQHAEPI*TPACPMCTEMH 93
PPP + G+ PSG++ P Q YS+ + +P P P T M+
Sbjct: 65 PPPMGIGAGVNPSGYVQQAPPLPTQGYSAYNQQPPPLPQQPYQTNMY 111
>U53153-8|AAC69040.1| 428|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 235 TFFSETGAGKHVPRAVFVDLEPTVVD 312
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 27.1 bits (57), Expect = 7.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 312 INDSRFEVDKHSPRHVFTSTGLTKECIEGVITAAQRLV 199
I + FE+ + PR +FT+ +K +E +T + LV
Sbjct: 318 IAGTTFEIQQPYPRRIFTNDDYSKTFLENQLTPSTALV 355
>AY305833-1|AAR11978.1| 428|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 428
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 235 TFFSETGAGKHVPRAVFVDLEPTVVD 312
T ++ TG+GK++ F DL P + D
Sbjct: 136 TTYTSTGSGKNIEYITFFDLTPIIKD 161
>AF273785-1|AAG15134.1| 423|Caenorhabditis elegans nuclear receptor
NHR-44 protein.
Length = 423
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 235 TFFSETGAGKHVPRAVFVDLEPTVVD 312
T ++ TG+GK++ F DL P + D
Sbjct: 131 TTYTSTGSGKNIEYITFFDLTPIIKD 156
>AF324489-1|AAK49910.1| 351|Caenorhabditis elegans F44C8.7-like
protein protein.
Length = 351
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 352 EQLITGKEDAANNYARGHYTIGNEIVDVVLDRIRKLAD 465
E ++TGK N+ TIGN IV + + + K AD
Sbjct: 246 EAVLTGKMFFGWNWIVWFVTIGNSIVGLCISLVMKYAD 283
>AF016438-4|AAB65894.2| 351|Caenorhabditis elegans Hypothetical
protein F44C8.7 protein.
Length = 351
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 352 EQLITGKEDAANNYARGHYTIGNEIVDVVLDRIRKLAD 465
E ++TGK N+ TIGN IV + + + K AD
Sbjct: 246 EAVLTGKMFFGWNWIVWFVTIGNSIVGLCISLVMKYAD 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,134,131
Number of Sequences: 27780
Number of extensions: 267774
Number of successful extensions: 839
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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