Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_A15
         (480 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.2  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   6.9  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   6.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   9.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.1  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 247 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 342
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 118 LARCVLRCIPSFWYML 71
           LA+CV    P  W+++
Sbjct: 129 LAKCVQESAPDVWFVI 144


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -3

Query: 118 LARCVLRCIPSFWYML 71
           LA+CV    P  W+++
Sbjct: 129 LAKCVQESAPDVWFVI 144


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 194 PRTRRWAAVMTPSIHSLVRPVLVNT 268
           P T+R    +  + + L+RPV+ NT
Sbjct: 32  PDTKRLYDDLLSNYNRLIRPVMNNT 56


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 124 LRLARCVLRCIPSFWYMLKIIYK 56
           L LA   + C+ + WY   ++Y+
Sbjct: 12  LLLAASPIDCVDANWYKNALVYQ 34


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 278 ALGTCLPAPVSLKNVL 231
           A GTC   P  L+N++
Sbjct: 6   ATGTCQKKPTKLRNLI 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,967
Number of Sequences: 438
Number of extensions: 3442
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)