Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A14
(538 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 167 1e-42
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 5e-42
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 149 3e-37
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 137 8e-34
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 107 1e-24
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 68 8e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 53 2e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 36 0.004
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 2.3
SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase |Schizosaccharo... 27 2.3
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 25 7.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 7.2
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 167 bits (405), Expect = 1e-42
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1
Query: 103 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 282
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 283 TIFDAKRLIGRKFEDATVQADMKHWPF 363
TIFDAKRLIGRKF+D VQ+DMKHWPF
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPF 90
Score = 73.7 bits (173), Expect = 2e-14
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +3
Query: 396 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
++V YKGE KTF PEE+SSMVL KM+ETAEAYLG V +AV+TVPAY
Sbjct: 101 LQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAY 147
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (400), Expect = 5e-42
Identities = 74/87 (85%), Positives = 81/87 (93%)
Frame = +1
Query: 103 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 282
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 283 TIFDAKRLIGRKFEDATVQADMKHWPF 363
TIFDAKRLIGR+F D VQ+DMKHWPF
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPF 90
Score = 69.7 bits (163), Expect = 3e-13
Identities = 32/47 (68%), Positives = 40/47 (85%)
Frame = +3
Query: 396 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
I+V +KGE KTF PEE+SSMVL KM+E+AEA+LG V +AV+TVPAY
Sbjct: 101 IQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAY 147
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 149 bits (360), Expect = 3e-37
Identities = 65/87 (74%), Positives = 75/87 (86%)
Frame = +1
Query: 103 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 282
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 283 TIFDAKRLIGRKFEDATVQADMKHWPF 363
T+FDAKRLIGR++ED Q D+KHWPF
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPF 94
Score = 61.3 bits (142), Expect = 9e-11
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = +3
Query: 396 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
I+V Y GE K F +E+S+MVLTKMKE +EA L K V+ AVITVPAY
Sbjct: 105 IEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAY 151
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 137 bits (332), Expect = 8e-34
Identities = 61/86 (70%), Positives = 73/86 (84%)
Frame = +1
Query: 106 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 285
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 286 IFDAKRLIGRKFEDATVQADMKHWPF 363
IFD KRLIGRKF++ T+ D+K +PF
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPF 123
Score = 65.7 bits (153), Expect = 4e-12
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +3
Query: 396 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
++V G+ K F PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAY
Sbjct: 134 VEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAY 180
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 107 bits (257), Expect = 1e-24
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +1
Query: 82 NKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKN 258
N+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 259 QVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPF 363
Q +NP NT F KRLIGR+F++ VQ D+K P+
Sbjct: 105 QAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPY 139
Score = 55.2 bits (127), Expect = 6e-09
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +3
Query: 423 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
KT+ P ++ +L+KM+ETA YLGK V+NAV+TVPAY
Sbjct: 156 KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAY 193
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 68.1 bits (159), Expect = 8e-13
Identities = 29/83 (34%), Positives = 52/83 (62%)
Frame = +1
Query: 91 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 270
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 271 NPNNTIFDAKRLIGRKFEDATVQ 339
N NT+ KRL GR ++D ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIK 85
Score = 33.1 bits (72), Expect = 0.027
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 399 KVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
KV Y E+ F ++ + TK+K AEA L +V + VI++PA+
Sbjct: 106 KVQYLNEETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAW 151
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 53.2 bits (122), Expect = 2e-08
Identities = 21/77 (27%), Positives = 45/77 (58%)
Frame = +1
Query: 106 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 285
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 286 IFDAKRLIGRKFEDATV 336
+ + + L+G+ ++ T+
Sbjct: 87 VTNFRDLLGKSHDELTL 103
Score = 30.3 bits (65), Expect = 0.19
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 417 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 536
++K E S L ++ E+AE +LG V V++VP Y
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVY 173
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.9 bits (79), Expect = 0.004
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 106 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 282
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 283 TIFDAKRLIGRK-FEDATVQADMKHWP 360
+I + K L+ E VQ +P
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 2.3
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = -2
Query: 270 HRNLVLGCITDKTLSVGERN 211
H++++L C +D+T+ +GE N
Sbjct: 321 HQDIILSCSSDRTIFLGELN 340
>SPAC1093.02 |||pyridoxamine 5'-phosphate oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 472 FIFVSTIELTSSGKKVLSSPLYATLIFWFTSIH*QPRKASVSCRLVR 332
FI + + + K + S+P YA+L FW+ + Q R + RL R
Sbjct: 86 FIIFTNLGTSKKAKDLKSNP-YASLSFWWEPLQRQVRVEGIIERLSR 131
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = -2
Query: 387 LPPFTDNLERPVFHVGLYGGIFKFASDKTFGIKDGVIGVHRNLVLGCITDKTLSVGERNV 208
L + DNL+ ++G++GG + + +G+ + G I TL + N+
Sbjct: 14 LGSYVDNLDTKQLNIGVWGGHVSLHNLRIKPEALDKLGIPIEITSGLIGTFTLEIPWSNL 73
Query: 207 RGRS 196
R +S
Sbjct: 74 RNKS 77
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.0 bits (52), Expect = 7.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 350 FMSACTVASSNLRPIRRLASKMVLLGFIATWFLAASPIRRSVS 222
F + C N +P S+ V GFI W +AA PI S +
Sbjct: 1543 FFTICAYTFMNSQPGLEDKSRAVN-GFIRIWIMAALPIAISTA 1584
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 109 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 195
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,061,397
Number of Sequences: 5004
Number of extensions: 38559
Number of successful extensions: 141
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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