Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A11
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 219 4e-57
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 219 4e-57
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 219 4e-57
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 219 4e-57
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 138 8e-33
U52144-1|AAC50455.1| 419|Homo sapiens isocitrate dehydrogenase ... 42 0.001
AK127398-1|BAC86959.1| 719|Homo sapiens protein ( Homo sapiens ... 31 3.3
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 219 bits (536), Expect = 4e-57
Identities = 99/114 (86%), Positives = 108/114 (94%)
Frame = +2
Query: 101 KRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 280
K K R+ KN+GLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 281 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 442
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVL
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVL 143
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 40 QTEKAFQKQATVFLNRK 90
QTE+A+QKQ T+F N+K
Sbjct: 5 QTERAYQKQPTIFQNKK 21
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 138 bits (335), Expect = 8e-33
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +2
Query: 239 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 418
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60
Query: 419 KTVRFNVL 442
KTVRFNVL
Sbjct: 61 KTVRFNVL 68
>U52144-1|AAC50455.1| 419|Homo sapiens isocitrate dehydrogenase
protein.
Length = 419
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -1
Query: 448 DLQYIEPDCLGKRPALANCDDVSDFHV 368
DL+++E CL +RPALA+CDDV+D V
Sbjct: 18 DLEHVEAHCLAQRPALAHCDDVTDLDV 44
>AK127398-1|BAC86959.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ45489 fis, clone BRTHA2005448, highly similar
to Mus musculus calpain 12 (Capn12). ).
Length = 719
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 7 RNSARGQYWADQTEKAFQKQATVFLNRKGGHEKEGYETF 123
R+ R ++WA EKA+ K + +GGH E + F
Sbjct: 169 RSEQRNEFWAPLLEKAYAKLHGSYEVMRGGHMNEAFVDF 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,839,451
Number of Sequences: 237096
Number of extensions: 1798742
Number of successful extensions: 7482
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7482
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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