Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A09
(378 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 219 1e-56
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 191 3e-48
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 146 1e-34
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 133 9e-31
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 126 2e-28
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 99 1e-20
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 78 5e-14
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 75 6e-13
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 74 1e-12
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 62 3e-09
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 61 8e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 59 3e-08
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 56 2e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 54 7e-07
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 54 9e-07
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 54 9e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 52 3e-06
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 52 4e-06
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 50 1e-05
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 50 2e-05
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 49 3e-05
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 48 6e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 46 3e-04
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 44 0.001
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 43 0.002
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 43 0.002
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 42 0.005
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 42 0.005
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 41 0.007
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 40 0.012
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 40 0.012
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 40 0.015
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 39 0.027
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 39 0.027
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.035
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.047
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 37 0.14
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 36 0.19
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 34 1.0
UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB... 33 1.3
UniRef50_Q66X01 Cluster: NACHT, LRR and PYD domains-containing p... 33 1.8
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 33 2.3
UniRef50_Q0D9L3 Cluster: Os06g0710800 protein; n=1; Oryza sativa... 33 2.3
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 33 2.3
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 32 3.1
UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;... 32 4.1
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 32 4.1
UniRef50_Q66X22-2 Cluster: Isoform 2 of Q66X22 ; n=1; Mus muscul... 31 5.4
UniRef50_Q4JSK5 Cluster: Queuine tRNA-ribosyltransferase; n=3; C... 31 5.4
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 31 5.4
UniRef50_Q4GZ19 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_A7CWP4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q7R4E5 Cluster: GLP_480_2944_1355; n=1; Giardia lamblia... 31 7.1
UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_UPI0000EBD07E Cluster: PREDICTED: similar to Glutaminyl... 31 9.4
UniRef50_UPI000051AA14 Cluster: PREDICTED: similar to NAD-depend... 31 9.4
UniRef50_Q9Q8F6 Cluster: M148R; n=2; Leporipoxvirus|Rep: M148R -... 31 9.4
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
UniRef50_A6RYY6 Cluster: Putative uncharacterized protein; n=1; ... 31 9.4
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 219 bits (535), Expect = 1e-56
Identities = 101/118 (85%), Positives = 109/118 (92%)
Frame = +3
Query: 24 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAK 203
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 204 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAVGDIPGV 377
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCL IEENDEVLVAGFGRKGHAVGDIPGV
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGV 118
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 191 bits (466), Expect = 3e-48
Identities = 86/117 (73%), Positives = 101/117 (86%)
Frame = +3
Query: 27 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 206
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 207 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAVGDIPGV 377
PNSAIRKCVRVQLIKNGKKVTAFVP DGCL ++ENDEVL+AGFGRKG A GDIPGV
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGV 120
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 146 bits (354), Expect = 1e-34
Identities = 70/107 (65%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
Frame = +3
Query: 6 RVRAIVMG-KPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLE 182
RVRA G K G+ RK HRR QRWADK +KK+H G WK PF G+SHAKGIVLE
Sbjct: 65 RVRAWSCGAKTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLE 123
Query: 183 KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEV 323
K+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCL I+EN V
Sbjct: 124 KIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 133 bits (322), Expect = 9e-31
Identities = 63/109 (57%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +3
Query: 54 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 233
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 234 RVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGF-GRKGHAVGDIPGV 377
R+QLIKNG+++TAF P DG + I+E+DEV + G GR G + GDIPGV
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGV 117
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 126 bits (303), Expect = 2e-28
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Frame = +3
Query: 33 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 212
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 213 SAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGF-GRKGHAVGDIPGV 377
+A+RKCVRVQL+KNGK VTAFVP DG L +I E+DEV++ G +G ++GDIPGV
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGV 122
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 99 bits (238), Expect = 1e-20
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = -3
Query: 376 TPGMSPTAWPLRPNPATNTSSFSSMCLRQPSRGTNAVTFLPFLMSCTRTHLRMAEFGCLA 197
TPG+SP A PL P PA TSSFSS +QPS GT AVTFLPFL++ T TH +AEFGCL
Sbjct: 31 TPGISPLALPLLPKPANKTSSFSSTKFKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLD 90
Query: 196 STPTFSRTMPLA 161
S P FS+T+PLA
Sbjct: 91 SIPIFSKTIPLA 102
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 78.2 bits (184), Expect = 5e-14
Identities = 44/118 (37%), Positives = 65/118 (55%)
Frame = -2
Query: 377 DSRNVTNSVAFTTESCN*HLIVLLNVLEATITRHECCHFLAVLNELYTNTLTNG*IRLLG 198
DSR++T S+ F+T+S N +I+ LN ++A I HE C L VLNEL+ + L +G I L G
Sbjct: 25 DSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFG 83
Query: 197 FNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTH 24
N FF+ ++L MR + + L VGF V P L+ ++ L + T H
Sbjct: 84 LNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAH 141
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 74.5 bits (175), Expect = 6e-13
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 33 PRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPN 212
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGVEA++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 213 SAIRKCVRVQLIKN 254
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
Score = 63.7 bits (148), Expect = 1e-09
Identities = 32/51 (62%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +3
Query: 228 CVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGF-GRKGHAVGDIPGV 377
CVRVQL KNGK VTAFVP DG L I E+DEV++ G +G A GD+PGV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGV 636
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 73.7 bits (173), Expect = 1e-12
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = -2
Query: 353 VAFTTESCN*HLIVLLNVLEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFED 174
+ F+T+S N + I+ LN ++A I HE C L VLNEL+ + L +G I L G N FF+
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 173 DALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPRFTHYDSA-NPR 3
++L MR T + + L VGF V P L+ ++ L + T H A PR
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHLAGATGPR 118
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 62.1 bits (144), Expect = 3e-09
Identities = 36/103 (34%), Positives = 65/103 (63%)
Frame = -2
Query: 377 DSRNVTNSVAFTTESCN*HLIVLLNVLEATITRHECCHFLAVLNELYTNTLTNG*IRLLG 198
D+R++++SV+ ++E + + +V+ + T++ +E HFL VL EL+++ L+NG + LLG
Sbjct: 37 DTRHISDSVSLSSEVLDENFVVIFCESKTTVSWNESSHFLVVLFELHSDALSNGCVWLLG 96
Query: 197 FNANFFEDDALSMRCTTEGVRLPSRTHVGFFEFLVGPSLLATM 69
F+ + F DDA +E + L SR H F + PSLL+++
Sbjct: 97 FDCDLFYDDACCAWSNSEWLILGSR-HC-FNVSCIVPSLLSSV 137
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 60.9 bits (141), Expect = 8e-09
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 126 RWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHI 305
R NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G H
Sbjct: 79 RKSKNPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG---HN 134
Query: 306 EENDEVLVAGFGRKGHAVGDIPGV 377
+ +++ GR D+PGV
Sbjct: 135 LQEHNIVLCRVGR----CRDVPGV 154
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 58.8 bits (136), Expect = 3e-08
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = +3
Query: 114 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 293
H+ R NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 294 LKHIEENDEVLVAGFGRKGHAVGDIPGV 377
+++E++ VLV GR + D PGV
Sbjct: 70 GHNLQEHNVVLVR-VGR----LKDCPGV 92
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 56.0 bits (129), Expect = 2e-07
Identities = 35/79 (44%), Positives = 50/79 (63%)
Frame = +3
Query: 141 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDE 320
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G +++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 321 VLVAGFGRKGHAVGDIPGV 377
VLV G GR D+PGV
Sbjct: 119 VLVEG-GR----TQDLPGV 132
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 54.4 bits (125), Expect = 7e-07
Identities = 31/71 (43%), Positives = 49/71 (69%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G +++E+ VLV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 345 KGHAVGDIPGV 377
V D+PGV
Sbjct: 146 ----VQDVPGV 152
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 54.0 bits (124), Expect = 9e-07
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +3
Query: 114 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 293
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG- 113
Query: 294 LKHIEENDEVLVAGFGRKGHAVGDIPGV 377
H + +++ GR + D+PGV
Sbjct: 114 --HNLQEHNIVLCRVGR----LQDVPGV 135
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 54.0 bits (124), Expect = 9e-07
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +3
Query: 114 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 293
H+ TR P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG- 99
Query: 294 LKHIEENDEVLVAGFGRKGHAVGDIPGV 377
H + +++ GR + D+PGV
Sbjct: 100 --HNLQEHNIVLCRVGR----LQDVPGV 121
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 52.4 bits (120), Expect = 3e-06
Identities = 34/82 (41%), Positives = 49/82 (59%)
Frame = +3
Query: 132 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEE 311
KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++E
Sbjct: 20 KAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQE 76
Query: 312 NDEVLVAGFGRKGHAVGDIPGV 377
+ VLV G GR V D+PGV
Sbjct: 77 HSIVLVRG-GR----VKDLPGV 93
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 52.0 bits (119), Expect = 4e-06
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +3
Query: 114 HMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 293
H+ R P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 117
Query: 294 LKHIEENDEVLVAGFGRKGHAVGDIPGV 377
H + +++ GR V D PGV
Sbjct: 118 --HNLQEHNIVLCRVGR----VQDCPGV 139
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 50.0 bits (114), Expect = 1e-05
Identities = 30/66 (45%), Positives = 42/66 (63%)
Frame = +3
Query: 150 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLV 329
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G +++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 330 AGFGRK 347
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 49.6 bits (113), Expect = 2e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3
Query: 297 KHIEENDEVLVAGFGRKGHAVGDIPGV 377
K ++ DEVL+AGFGRKGHAVGDIPGV
Sbjct: 218 KQMDVYDEVLIAGFGRKGHAVGDIPGV 244
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 48.8 bits (111), Expect = 3e-05
Identities = 33/82 (40%), Positives = 45/82 (54%)
Frame = +3
Query: 132 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEE 311
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 312 NDEVLVAGFGRKGHAVGDIPGV 377
+ VLV G GR D+PGV
Sbjct: 105 HQIVLVEG-GR----TQDLPGV 121
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 48.0 bits (109), Expect = 6e-05
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +3
Query: 150 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLV 329
G K + + + ++PNSA+RK RV+L NG+ TA++P +G +++E+ VLV
Sbjct: 77 GCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLV 133
Query: 330 AGFGRKGHAVGDIPGV 377
G G K D+PGV
Sbjct: 134 RGGGAK-----DLPGV 144
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 45.6 bits (103), Expect = 3e-04
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
+GI L V K+PNSA+RK RV+L G +VTA++P G +++E+ VLV G GR
Sbjct: 31 RGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRG-GR 86
Query: 345 KGHAVGDIPGV 377
V D+PGV
Sbjct: 87 ----VKDLPGV 93
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 43.6 bits (98), Expect = 0.001
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 345 KGHAVGDIPGV 377
D+PGV
Sbjct: 115 ----CQDLPGV 121
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 42.7 bits (96), Expect = 0.002
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +3
Query: 150 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLV 329
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G + +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 330 AGFGRKGHAVGDIPGV 377
G GR D PGV
Sbjct: 104 RG-GR----AQDCPGV 114
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 42.7 bits (96), Expect = 0.002
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 132 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKH-IE 308
++NPF G+ L V K+PNSA+RK V+L N + V A++P + KH ++
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIPGE---KHSVK 75
Query: 309 ENDEVLVAGFGRKGHAVGDIPGV 377
E+D VLV +G V D+PGV
Sbjct: 76 EHDRVLV-----RGGQVPDLPGV 93
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 41.5 bits (93), Expect = 0.005
Identities = 28/76 (36%), Positives = 42/76 (55%)
Frame = +3
Query: 150 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLV 329
G KG+ L+ + K+PNS RK R++L NG VT ++P +G +I+++ VL+
Sbjct: 105 GRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPGEG--HNIQQHSVVLI 161
Query: 330 AGFGRKGHAVGDIPGV 377
G GR D PGV
Sbjct: 162 RG-GR----AQDCPGV 172
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 41.5 bits (93), Expect = 0.005
Identities = 24/71 (33%), Positives = 46/71 (64%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
KG+ ++ K+PNSA+RK +++L KN K++ A++P +G +++++ VL+ +
Sbjct: 29 KGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----K 81
Query: 345 KGHAVGDIPGV 377
KG V D+PG+
Sbjct: 82 KGR-VQDLPGI 91
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 41.1 bits (92), Expect = 0.007
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3
Query: 315 DEVLVAGFGRKGHAVGDIPGV 377
DEVL++GFG KGHAVGDI GV
Sbjct: 67 DEVLISGFGHKGHAVGDIRGV 87
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 40.3 bits (90), Expect = 0.012
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +3
Query: 183 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAV 359
+VG+ + K+PNS RK RV+L GK +TA++P +G +I+++ VLV G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 360 GDIPGV 377
D PGV
Sbjct: 101 QDCPGV 106
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 40.3 bits (90), Expect = 0.012
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
KGI ++ K+PNSA RK +V L NGK + ++ +G ++E+ VLV G GR
Sbjct: 31 KGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HTLQEHSLVLVRG-GR 86
Query: 345 KGHAVGDIPGV 377
V D+PGV
Sbjct: 87 ----VKDLPGV 93
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 39.9 bits (89), Expect = 0.015
Identities = 36/113 (31%), Positives = 55/113 (48%)
Frame = +3
Query: 39 GIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSA 218
G T + + H RE++ H R +A G +G+ L K+PNSA
Sbjct: 63 GFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTRTPKKPNSA 111
Query: 219 IRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAVGDIPGV 377
+ K +V+L N V A++P +G +++E+ VLV G GR V D+PGV
Sbjct: 112 LGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPGV 156
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 39.1 bits (87), Expect = 0.027
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +3
Query: 201 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAVGDIPGV 377
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGV 92
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 39.1 bits (87), Expect = 0.027
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +3
Query: 168 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRK 347
G+ L K+PNSA+RK +V+L N + A++P +G +++E+ VL+ G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 348 GHAVGDIPGV 377
V D+PGV
Sbjct: 87 ---VKDLPGV 93
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 38.7 bits (86), Expect = 0.035
Identities = 26/71 (36%), Positives = 42/71 (59%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 345 KGHAVGDIPGV 377
V D PG+
Sbjct: 92 ----VQDCPGI 98
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 38.3 bits (85), Expect = 0.047
Identities = 26/76 (34%), Positives = 43/76 (56%)
Frame = +3
Query: 150 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLV 329
G KG+ ++ V+ K+PNSA RK +++L + + A++P G +++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 330 AGFGRKGHAVGDIPGV 377
+G GR D+PGV
Sbjct: 83 SG-GR----APDLPGV 93
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 36.7 bits (81), Expect = 0.14
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
+G + + + K+PNSA RK ++L KN KK+ A++P + + + + VL+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIPGERSV--VRDKTRVLIRGGNT 84
Query: 345 KGHAVGDIPGV 377
+ D+PGV
Sbjct: 85 R-----DLPGV 90
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 36.3 bits (80), Expect = 0.19
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +3
Query: 150 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLV 329
G KG+ + V ++PNS +RK RV+L G+ VT VP +G ++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 330 AG 335
G
Sbjct: 184 RG 185
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 33.9 bits (74), Expect = 1.0
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
K I L+ + + K+PNSA R+ +V+ +K +T +P G +++++ VL+ G GR
Sbjct: 32 KVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GR 88
Query: 345 KGHAVG 362
+G
Sbjct: 89 SKDLIG 94
>UniRef50_A0Z7N1 Cluster: Putative Mg2+ and Co2+ transporter CorB;
n=1; marine gamma proteobacterium HTCC2080|Rep: Putative
Mg2+ and Co2+ transporter CorB - marine gamma
proteobacterium HTCC2080
Length = 397
Score = 33.5 bits (73), Expect = 1.3
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -2
Query: 233 NTLTNG*IRLLGFNANFFEDDALSMR-----CTTEGVRLPSR 123
N++TNG ++L+GF + D+ALS T G R+PSR
Sbjct: 118 NSVTNGLLKLMGFRPDLQNDEALSQEELRTIVTESGTRIPSR 159
>UniRef50_Q66X01 Cluster: NACHT, LRR and PYD domains-containing
protein 9C; n=19; Murinae|Rep: NACHT, LRR and PYD
domains-containing protein 9C - Mus musculus (Mouse)
Length = 1004
Score = 33.1 bits (72), Expect = 1.8
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = -2
Query: 302 VLEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSR 123
VLE+ + + C F+A LY L+N + LL +NF ED +++ C E ++ P+
Sbjct: 779 VLESLMLSYCCLTFIAC-GHLYEALLSNKHLSLLDLGSNFLEDIGVNLLC--EALKYPNC 835
Query: 122 T 120
T
Sbjct: 836 T 836
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 32.7 bits (71), Expect = 2.3
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
+G+ L K+PNSA+RK +V+L N + A +P +G + +E+ VLV G GR
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR 118
Query: 345 KGHAVGDIPG 374
V D PG
Sbjct: 119 ----VKDSPG 124
>UniRef50_Q0D9L3 Cluster: Os06g0710800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0710800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 160
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 2 HEGSRYRNG*TSGYSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEP 142
H G+R R G GA R++ RA GR+ +Q+ P G + G P
Sbjct: 64 HPGARPRRPDARG--RGAPPRDAPPRAPPGRRALQRPPRGAPLHGAP 108
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.7 bits (71), Expect = 2.3
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 57 KHVNHRREQ--RWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKC 230
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 231 VRVQLIK 251
+++L++
Sbjct: 86 EKIELVQ 92
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 32.3 bits (70), Expect = 3.1
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 165 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGR 344
+G VL+ V K+PNSA R + +L N K V A +P G ++ ++ +LV G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKL-TNKKFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 345 KGHAVGDIPGV 377
+ D+PGV
Sbjct: 88 R-----DLPGV 93
>UniRef50_A4XF13 Cluster: Transcriptional regulator, LysR family;
n=1; Novosphingobium aromaticivorans DSM 12444|Rep:
Transcriptional regulator, LysR family - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 315
Score = 31.9 bits (69), Expect = 4.1
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 54 RKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQ 206
R+H + W EF A G W ANP G A+ A G+V + KQ
Sbjct: 193 RRHAGALQSLGWG-YEFDAALPGGPWSANPAGEAAQAAGLVTFNAWPQLKQ 242
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 31.9 bits (69), Expect = 4.1
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +3
Query: 201 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAVGDIPGV 377
K+PNSA+RK +V+L N V +P +G +++E+ +L G GR V D+PGV
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGV 96
>UniRef50_Q66X22-2 Cluster: Isoform 2 of Q66X22 ; n=1; Mus
musculus|Rep: Isoform 2 of Q66X22 - Mus musculus (Mouse)
Length = 501
Score = 31.5 bits (68), Expect = 5.4
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = -2
Query: 302 VLEATITRHECCHFLAVLNELYTNTLTNG*IRLLGFNANFFEDDALSMRCTTEGVRLPSR 123
VL++ + + C F+A LY L+N + LL +NF ED +++ C E ++ P+
Sbjct: 338 VLQSLMLSYCCLTFIAC-GHLYEALLSNKHLSLLDLGSNFLEDTGVNLLC--EALKDPNC 394
Query: 122 T 120
T
Sbjct: 395 T 395
>UniRef50_Q4JSK5 Cluster: Queuine tRNA-ribosyltransferase; n=3;
Corynebacterineae|Rep: Queuine tRNA-ribosyltransferase -
Corynebacterium jeikeium (strain K411)
Length = 482
Score = 31.5 bits (68), Expect = 5.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 35 SGYSHGAQARESSSRAAMGRQGIQKSPHG 121
+G G AR + S A+GR G+ K+PHG
Sbjct: 63 AGAGAGGSARLNGSAGALGRTGVIKTPHG 91
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 31.5 bits (68), Expect = 5.4
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 201 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLKHIEENDEVLVAGFGRKGHAVGDIPGV 377
K+ NSA+RK RV+L +G ++T ++P G + +E+ VLV G GR V D+P V
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNV 226
>UniRef50_Q4GZ19 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 76
Score = 31.5 bits (68), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 75 REQRWADKEFKKAHMGTRWKANPFGG 152
RE+R ++ K H G+RW A+ +GG
Sbjct: 48 REKRSGSTQYWKVHTGSRWSASTYGG 73
>UniRef50_A7CWP4 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 415
Score = 31.1 bits (67), Expect = 7.1
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 373 PGMSPTAWPLRPNPATNTSSFSSMCLRQPSRGTNAVT 263
P +P+AW PAT +S+ ++ + +P G+ AVT
Sbjct: 249 PSPTPSAWTPAATPATTSSTTATTPMPRPPSGSTAVT 285
>UniRef50_Q7R4E5 Cluster: GLP_480_2944_1355; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_2944_1355 - Giardia lamblia ATCC
50803
Length = 529
Score = 31.1 bits (67), Expect = 7.1
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 251 LNELYTNTLTNG*IRLLGFNANFFEDDAL-SMRCTTEGVRLPSRTH 117
+ ++T TL G R L + E DAL + ++ GVRLP++TH
Sbjct: 166 MTSVHTQTLNQGLSRALAASGLADESDALITSAVSSSGVRLPTQTH 211
>UniRef50_A5E4V1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 515
Score = 31.1 bits (67), Expect = 7.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 171 IVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 290
++L KVG + P+ + +CV L + + V +F+P DG
Sbjct: 266 LILNKVGAHLELPS--LHRCVNYDLFRERRGVLSFIPPDG 303
>UniRef50_UPI0000EBD07E Cluster: PREDICTED: similar to
Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1;
n=1; Bos taurus|Rep: PREDICTED: similar to
Glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
- Bos taurus
Length = 447
Score = 30.7 bits (66), Expect = 9.4
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Frame = +3
Query: 168 GIVLEKVGVEAKQ----PNSAIRKCVRVQLIKNGKKVTAF--VPRDGCLKHIEENDEVLV 329
G L +V V KQ P ++C+ LIK K + A+ V + LK EE+++
Sbjct: 3 GRTLREVSVALKQGQITPTELCQRCL--SLIKKTKFLNAYITVSEEVALKQAEESEKRY- 59
Query: 330 AGFGRKGHAVGDIPGV 377
+KGH++GD+ G+
Sbjct: 60 ----KKGHSLGDLDGI 71
>UniRef50_UPI000051AA14 Cluster: PREDICTED: similar to NAD-dependent
deacetylase sirtuin-1 (hSIRT1) (hSIR2) (SIR2-like
protein 1); n=1; Apis mellifera|Rep: PREDICTED: similar
to NAD-dependent deacetylase sirtuin-1 (hSIRT1) (hSIR2)
(SIR2-like protein 1) - Apis mellifera
Length = 868
Score = 30.7 bits (66), Expect = 9.4
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = -1
Query: 225 YEWLNSAAWLQRQLFRGRCP*HEMHH 148
++W N+++W+Q+Q+ G P + +HH
Sbjct: 128 HQWRNASSWVQKQMLIGADPRNLLHH 153
>UniRef50_Q9Q8F6 Cluster: M148R; n=2; Leporipoxvirus|Rep: M148R -
Myxoma virus
Length = 675
Score = 30.7 bits (66), Expect = 9.4
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 241 SSLRTARK*QHSCRVMVASSTLRRTMRC*LQDSVVKATLLVTFLES 378
SS+RTA HS +M SS RR + L+ VKA +L T L++
Sbjct: 19 SSIRTALNHAHSPFLMEVSSYKRRVVEDYLKKKYVKAAVLKTLLDT 64
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 30.7 bits (66), Expect = 9.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 259 LPFLMSCTRTHLRMAEFGCLASTPTFSRTMPLA 161
LP + R+H ++ E C + P +S T+P A
Sbjct: 239 LPTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_A6RYY6 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1390
Score = 30.7 bits (66), Expect = 9.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 24 MGKPRGIRTARKHVNHRREQRWADKEFKK 110
+GKPRG+R ++ RREQR A+ E +
Sbjct: 32 VGKPRGMRDDSAYIRSRREQRRANLELNQ 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,685,195
Number of Sequences: 1657284
Number of extensions: 8700004
Number of successful extensions: 23888
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 23227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23857
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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