Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A09
(378 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 2.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.6
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 4.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 4.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 4.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 4.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 4.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 8.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 8.4
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 8.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 8.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 8.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 8.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 8.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 8.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 8.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 8.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 8.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 8.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 8.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 8.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 8.4
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 20 8.4
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 1.2
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +3
Query: 45 RTARKHVNHRRE----QRWADKEFKKAH--MGTRWKANPFGGASHAKGIVLEKVGVEAKQ 206
RT + + +RRE Q+ ++E++K M ++ +H K +VLE+ ++K
Sbjct: 30 RTKEERLQYRREAWLVQQEREQEYEKLKRKMILEYELYIKYSHTHEKKLVLERSKTKSKS 89
Query: 207 PNSAIR 224
P S R
Sbjct: 90 PESRDR 95
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 2.8
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 207 PNSAIRKCV 233
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 348 GHAVGDIPGV 377
GH V D+PGV
Sbjct: 69 GHPVNDVPGV 78
Score = 20.6 bits (41), Expect = 6.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 115 TWVRDGRRTP 144
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.6
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 348 GHAVGDIPGV 377
GH V D+PGV
Sbjct: 69 GHPVNDVPGV 78
Score = 20.6 bits (41), Expect = 6.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = +1
Query: 115 TWVRDGRRTP 144
TW +DGR+ P
Sbjct: 366 TWYKDGRQLP 375
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 4.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 53 AQARESSSRAAMGRQGIQKSPHGYEMEGEPLRWCISC*GH 172
A + E+S+ A + + K P + + RW SC G+
Sbjct: 34 ATSHEASAPAEGKFKTVSKVPGPFSLPIFGTRWIFSCIGY 73
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 4.8
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 348 GHAVGDIPGV 377
G AVGD+PG+
Sbjct: 42 GSAVGDVPGL 51
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 66 SRACAPCEYPEV--YP 25
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
Score = 20.2 bits (40), Expect = 8.4
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +3
Query: 282 RDGCLKHIEEN--DEVLVAG 335
+D CLK I+EN D +V+G
Sbjct: 423 QDDCLKAIKENNADLTVVSG 442
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 66 SRACAPCEYPEV--YP 25
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
Score = 20.2 bits (40), Expect = 8.4
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +3
Query: 282 RDGCLKHIEEN--DEVLVAG 335
+D CLK I+EN D +V+G
Sbjct: 423 QDDCLKAIKENNADLTVVSG 442
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 4.8
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
Frame = -1
Query: 66 SRACAPCEYPEV--YP 25
S CA CE PEV YP
Sbjct: 216 SNMCALCEKPEVCDYP 231
Score = 20.2 bits (40), Expect = 8.4
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +3
Query: 282 RDGCLKHIEEN--DEVLVAG 335
+D CLK I+EN D +V+G
Sbjct: 423 QDDCLKAIKENNADLTVVSG 442
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 175 INKIEEHDTVLVVNIKKSGN 194
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 175 INKIEEHDTVLVVNIKKSGN 194
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 175 INKIEEHDTVLVVNIKKSGN 194
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIEKSGN 205
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 294 LKHIEENDEVLVAGFGRKGH 353
+ IEE+D VLV + G+
Sbjct: 186 INKIEEHDTVLVVNIKKSGN 205
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.2 bits (40), Expect = 8.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 132 SISYPCGLF*IPCRPIAARD 73
++SY G + IP I++RD
Sbjct: 113 AVSYTSGFYHIPVIGISSRD 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,468
Number of Sequences: 438
Number of extensions: 2176
Number of successful extensions: 30
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 9176370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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