Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A08
(256 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 133 2e-32
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 74 2e-14
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 73 2e-14
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 73 2e-14
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 73 3e-14
03_01_0034 + 318432-318825,318902-319851 72 7e-14
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 71 1e-13
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 71 2e-13
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 70 3e-13
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 65 8e-12
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 63 3e-11
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 60 2e-10
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 44 1e-05
09_04_0281 - 16360082-16361059,16361608-16361688,16363287-163636... 28 0.90
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 27 2.1
10_07_0151 + 13430925-13431240,13431858-13432015,13432996-134330... 27 2.8
05_06_0016 + 24958681-24958872,24959390-24959472,24959534-249596... 27 2.8
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 27 2.8
12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589,761... 26 3.6
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 26 3.6
08_02_0092 + 12265446-12265809,12266147-12266743,12266792-122668... 26 4.8
03_06_0275 + 32806682-32807197,32808118-32808198,32808293-328085... 26 4.8
11_03_0126 + 10371536-10371596,10372467-10372544,10373968-103741... 25 6.4
10_08_0315 - 16686830-16687297 25 6.4
06_03_0247 + 18679278-18679319,18679522-18679620,18679897-186801... 25 6.4
04_03_0793 + 19699355-19699472,19700245-19700633,19700824-197010... 25 6.4
12_02_1075 - 25854662-25855015,25855895-25856045,25856141-258563... 25 8.4
11_08_0059 + 28104958-28105827 25 8.4
09_03_0023 + 11617562-11617692,11617773-11617844,11620438-116205... 25 8.4
09_03_0013 - 11522505-11522901,11522993-11523182,11523513-115235... 25 8.4
06_01_0982 + 7627420-7628141,7628190-7628643,7629167-7629823,762... 25 8.4
03_06_0761 - 36072849-36072895,36072987-36073043,36073280-360733... 25 8.4
02_04_0648 - 24716249-24717841 25 8.4
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 133 bits (322), Expect = 2e-32
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG EFWKQLC+EHGI +G+LE+FA+ G DRKDVFFYQADD HYIPRA+L+DLEPRV
Sbjct: 14 GNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIPRALLVDLEPRV 73
Query: 190 IHSILNSPYAKLYNPENVYLSK 255
I+ I NS Y LYN EN+++++
Sbjct: 74 INGIQNSEYRNLYNHENIFVAE 95
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 73.7 bits (173), Expect = 2e-14
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHGI P G + +R +V++ +A ++PRAVL+DLEP
Sbjct: 193 GNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGT 252
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ PY +++ P+N
Sbjct: 253 MDSVRTGPYGQIFRPDN 269
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 73.3 bits (172), Expect = 2e-14
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHGI P G + +R +V++ +A ++PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ PY +++ P+N
Sbjct: 73 MDSVRTGPYGQIFRPDN 89
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 73.3 bits (172), Expect = 2e-14
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHGI P G + +R +V++ +A ++PRAVL+DLEP
Sbjct: 13 GNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ PY +++ P+N
Sbjct: 73 MDSVRTGPYGQIFRPDN 89
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 72.9 bits (171), Expect = 3e-14
Identities = 30/77 (38%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHGI G + +R +V++ +A Y+PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + PY +++ P+N
Sbjct: 73 MDSVRSGPYGQIFRPDN 89
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 71.7 bits (168), Expect = 7e-14
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHGI G + + +R +V++ +A ++PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + PY ++ P+N
Sbjct: 73 MDSVRSGPYGHIFRPDN 89
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 70.9 bits (166), Expect = 1e-13
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHG+ G + +R +V++ +A Y+PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +++ P+N
Sbjct: 73 MDSVRSGPFGQIFRPDN 89
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 70.5 bits (165), Expect = 2e-13
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHG+ P G + +R +V+F +A ++PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P ++ P+N
Sbjct: 73 MDSLRSGPIGGIFRPDN 89
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 69.7 bits (163), Expect = 3e-13
Identities = 28/77 (36%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ +C EHGI G + +R +V++ +A ++PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFVPRAVLMDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +++ P+N
Sbjct: 73 MDSVRSGPFGQIFRPDN 89
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 64.9 bits (151), Expect = 8e-12
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYIPRAVLLDL 177
+ G +G W+ C+EHGI P+G + ++ G D + FF + ++PRAV +DL
Sbjct: 11 QAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI + Y +L++PE + K
Sbjct: 71 EPTVIDEVRTGDYRQLFHPEQLISGK 96
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 63.3 bits (147), Expect = 3e-11
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAG--SDRKDVFFYQADDDHYIPRAVLLDL 177
+ G +G W+ C+EHGI P+G + + G D + FF + ++PRA+ +DL
Sbjct: 11 QAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI + Y +L++PE + K
Sbjct: 71 EPTVIDEVRTGSYRQLFHPEQLISGK 96
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 60.1 bits (139), Expect = 2e-10
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYIPRAVLLDL 177
+ G +G W+ C+EHGI +G + + G D + FF + ++PRAV +DL
Sbjct: 11 QAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI + Y +L++PE + K
Sbjct: 71 EPTVIDEVRTGCYRQLFHPEQLINGK 96
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 44.4 bits (100), Expect = 1e-05
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 106 DRKDVFFYQADDDHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENV 243
D + FF + ++PRA+ +DLEP VI + PY +L++PE +
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQL 152
Score = 31.9 bits (69), Expect = 0.073
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGIL 81
+ G +G W+ C+EHGI P+G++
Sbjct: 11 QAGIQVGNSCWELYCLEHGIQPDGLM 36
>09_04_0281 -
16360082-16361059,16361608-16361688,16363287-16363650,
16363675-16364348
Length = 698
Score = 28.3 bits (60), Expect = 0.90
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 106 DRKDVFFYQADDDHYIP 156
+ ++ F Y+ DDDHY+P
Sbjct: 48 EEQEEFLYEIDDDHYVP 64
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/72 (25%), Positives = 26/72 (36%)
Frame = +1
Query: 28 EFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRVIHSILN 207
EFW H I E I E A KD+ +Y+ + D P +S+L
Sbjct: 133 EFWLNAMKNHEILSEEIQERDEEALKYLKDIKWYRISEPKGFKLEFYFDTNPFFKNSVLT 192
Query: 208 SPYAKLYNPENV 243
Y + E +
Sbjct: 193 KTYHMIDEDEPI 204
>10_07_0151 +
13430925-13431240,13431858-13432015,13432996-13433042,
13433818-13433881,13434795-13435243,13435618-13435848,
13436181-13436226
Length = 436
Score = 26.6 bits (56), Expect = 2.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 13 NPIGFEFWKQLCIEHGISP 69
NP+ +EF + LCI+H P
Sbjct: 251 NPLPYEFERSLCIKHNDDP 269
>05_06_0016 +
24958681-24958872,24959390-24959472,24959534-24959621,
24960250-24960468,24960958-24961692,24961780-24962124,
24962196-24962411,24962551-24962847
Length = 724
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 139 HQLDKRIHLYDPIQLKRTPPKCPRVI 62
H +D+R I L+R P +CP V+
Sbjct: 35 HTVDRRFAFERAIPLRRRPRRCPNVL 60
>02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 142 DHYIPRAVLLDLEPRVIHSILNSPYAKLYN 231
+ Y P LLDL+P + ++ N+ Y LY+
Sbjct: 1328 EKYAPPTELLDLQPLPVTALRNARYEGLYS 1357
>12_01_0825 -
7611594-7611728,7612061-7612276,7612505-7612589,
7613170-7613372,7613935-7615723,7616322-7616450,
7616825-7616928,7618725-7618779,7618860-7618975
Length = 943
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 13 NPIGFEFWKQLCIEHGIS-PEGILEEFASAGSDRKDVFFYQADDDHYIPRAVL 168
N + E W+ + ++ +S P+ + + S + + DV+ QAD++ P +L
Sbjct: 355 NCLKSELWQDISLQSLLSGPDAVETDSFSRSNHQSDVYSSQADNEFLAPPYLL 407
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 142 DHYIPRAVLLDLEPRVIHSILNSPYAKLY 228
+ Y P L+DL+P + ++ N+ Y LY
Sbjct: 1297 EKYAPPTELIDLQPLPVTALRNARYESLY 1325
>08_02_0092 +
12265446-12265809,12266147-12266743,12266792-12266861,
12267325-12267427
Length = 377
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 178 EPRVIHSILNSPYAKLYNPENVYL 249
EP V SIL PY Y P ++YL
Sbjct: 304 EPEVYFSIL--PYMSFYTPASIYL 325
>03_06_0275 +
32806682-32807197,32808118-32808198,32808293-32808568,
32808670-32809182
Length = 461
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 28 EFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDD 144
++++ + + + +S G EE+ G DR + FF DD
Sbjct: 154 KWFRVVMLLNPVSTPGHFEEYFPVGGDRPESFFSAFSDD 192
>11_03_0126 +
10371536-10371596,10372467-10372544,10373968-10374127,
10374286-10374610,10374708-10374860,10374985-10375236,
10375356-10375445,10375543-10375621,10375712-10375818,
10375921-10376048,10376329-10376419
Length = 507
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 184 RVIHSILNSPYAKLYNPENV 243
R H ++ S KLY PENV
Sbjct: 156 RTAHKLIRSFVCKLYGPENV 175
>10_08_0315 - 16686830-16687297
Length = 155
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -1
Query: 118 HLYDPIQLKRTPPKCPRVIFHVLYITVSKIRNRLGFHLV 2
H+Y+ +LK++ P C + L ++ N +G +V
Sbjct: 114 HVYEIAKLKQSDPYCKHMSLEALCKSIIGTANSMGIEIV 152
>06_03_0247 +
18679278-18679319,18679522-18679620,18679897-18680100,
18680334-18680431,18680554-18680641,18680728-18681078,
18682093-18682623
Length = 470
Score = 25.4 bits (53), Expect = 6.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 52 EHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRVIHSILNSPYAKL 225
E G I+E +AG++ + D+H+I + + E R I LNSP +L
Sbjct: 409 EVGCGISEIMELIVNAGAE-------EGSDEHFIATLLFIKPEYREIFLTLNSPQGRL 459
>04_03_0793 +
19699355-19699472,19700245-19700633,19700824-19701065,
19701150-19701663
Length = 420
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 178 EPR-VIHSILNSPYAKLYNPENVYL 249
+PR H ILN KL +PE VYL
Sbjct: 376 QPRDAFHQILNGLARKLPHPEGVYL 400
>12_02_1075 -
25854662-25855015,25855895-25856045,25856141-25856378,
25856494-25856704,25856973-25857088,25857844-25857877,
25857996-25858253
Length = 453
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 133 LDKRIHLYDPIQLKRTPPKCP 71
+D +I +P+Q +PPK P
Sbjct: 411 MDLKIRTVEPVQFSASPPKSP 431
>11_08_0059 + 28104958-28105827
Length = 289
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 70 EGILEEFASAGSDRKDVFFYQADDDHY 150
+G+L F +A D D F + DHY
Sbjct: 131 KGVLRPFGNAAVDGIDFFIDRGSGDHY 157
>09_03_0023 +
11617562-11617692,11617773-11617844,11620438-11620595,
11620677-11620939,11621041-11621167,11621748-11621816,
11621931-11622120,11622309-11622672
Length = 457
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 151 IPRAVLLDLEPRVIHSILNSPYAKLYNPENVYLS 252
IPR + +DL +H +++S + L E +Y S
Sbjct: 38 IPRIISIDLSNSNLHGVISSNFTSLTALEYLYES 71
>09_03_0013 -
11522505-11522901,11522993-11523182,11523513-11523581,
11523983-11524109,11524229-11524491,11524597-11524751,
11524906-11524983,11527737-11527808,11527888-11528026,
11528674-11529103
Length = 639
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 151 IPRAVLLDLEPRVIHSILNSPYAKLYNPENVYLS 252
IPR + LDL +H ++++ + L EN+ L+
Sbjct: 184 IPRIISLDLSNSNLHGVISNNFTLLTALENLNLT 217
>06_01_0982 +
7627420-7628141,7628190-7628643,7629167-7629823,
7629975-7630469
Length = 775
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 110 RSDPAEANSSKMPSGDIPCS 51
R+D +EA S+ PS DIPCS
Sbjct: 132 RTDDSEAQSA--PSQDIPCS 149
>03_06_0761 -
36072849-36072895,36072987-36073043,36073280-36073364,
36073911-36073992,36074050-36074123,36074207-36074299,
36074358-36074412,36074583-36074656,36076319-36076441
Length = 229
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 151 YSDHHQLDKRIHLYDPIQLK 92
+SDH +L R+ LYD +LK
Sbjct: 57 FSDHQRLLHRLELYDLAELK 76
>02_04_0648 - 24716249-24717841
Length = 530
Score = 25.0 bits (52), Expect = 8.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 22 GFEFWKQLCIEHGISPE 72
G +++ +C EHGI PE
Sbjct: 366 GLRYFELMCDEHGIEPE 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,379,202
Number of Sequences: 37544
Number of extensions: 132815
Number of successful extensions: 341
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 14,793,348
effective HSP length: 63
effective length of database: 12,428,076
effective search space used: 260989596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -