Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A08
(256 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 91 1e-19
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 91 1e-19
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 77 2e-15
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 77 2e-15
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 74 2e-14
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 71 9e-14
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 71 9e-14
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 70 2e-13
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 69 6e-13
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 69 6e-13
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 69 6e-13
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 66 3e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 66 3e-12
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 66 3e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 66 3e-12
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 66 3e-12
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 66 3e-12
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 64 1e-11
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 64 1e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 64 1e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 64 1e-11
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 64 2e-11
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 61 9e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 60 2e-10
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 57 2e-09
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 50 2e-07
U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin recep... 28 0.80
AC084154-13|AAK29875.2| 445|Caenorhabditis elegans Serotonin/oc... 28 0.80
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 27 2.4
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 27 2.4
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 26 3.2
Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical pr... 25 5.6
U97012-7|AAK39139.2| 387|Caenorhabditis elegans Hypothetical pr... 25 5.6
CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical ... 25 5.6
Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 25 7.4
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 25 7.4
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 25 7.4
AF077540-7|AAC26307.2| 314|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 90.6 bits (215), Expect = 1e-19
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN + FWK + EHGI+ G +D+KD+ FYQADDDHY+PRAVL+DLEPRV
Sbjct: 16 GNQLAQAFWKSMVDEHGINERGQTTHEDDM-NDKKDLLFYQADDDHYVPRAVLVDLEPRV 74
Query: 190 IHSILNSP-YAKLYNPENVYLS 252
I+ ++ SP ++ L+N +N+++S
Sbjct: 75 INGMMQSPNFSNLFNTDNIFMS 96
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 90.6 bits (215), Expect = 1e-19
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN + FWK + EHGI+ G +D+KD+ FYQADDDHY+PRAVL+DLEPRV
Sbjct: 16 GNQLAQAFWKSMVDEHGINERGQTTHEDDM-NDKKDLLFYQADDDHYVPRAVLVDLEPRV 74
Query: 190 IHSILNSP-YAKLYNPENVYLS 252
I+ ++ SP ++ L+N +N+++S
Sbjct: 75 INGMMQSPNFSNLFNTDNIFMS 96
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 77.0 bits (181), Expect = 2e-15
Identities = 31/77 (40%), Positives = 52/77 (67%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHGI P+G + + +R DV++ +A++ Y+PRAVL+DLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +L+ P+N
Sbjct: 73 MDSVRSGPFGQLFRPDN 89
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 76.6 bits (180), Expect = 2e-15
Identities = 31/77 (40%), Positives = 51/77 (66%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHGI P+G + +R DV++ +A++ Y+PRAVL+DLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +L+ P+N
Sbjct: 73 MDSVRSGPFGQLFRPDN 89
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 73.7 bits (173), Expect = 2e-14
Identities = 30/77 (38%), Positives = 51/77 (66%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHGI P+G + + +R +V++ +A+ Y+PRAVL+DLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +L+ P+N
Sbjct: 73 MDSVRSGPFGQLFRPDN 89
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 71.3 bits (167), Expect = 9e-14
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHGI P G + +R +V++ +A + Y+PRAVL+DLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +L+ P+N
Sbjct: 73 MDSVRSGPFGQLFRPDN 89
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 71.3 bits (167), Expect = 9e-14
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHGI P G + +R +V++ +A + Y+PRAVL+DLEP
Sbjct: 13 GNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ + P+ +L+ P+N
Sbjct: 73 MDSVRSGPFGQLFRPDN 89
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 70.1 bits (164), Expect = 2e-13
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRK--DVFFYQADDDHYIPRAVLLDL 177
+ G IG W+ C+EHGI+P+G++ + S G + + + FF + ++PRA+ +DL
Sbjct: 11 QAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI + YAKL++PE + K
Sbjct: 71 EPTVIDEVRTGTYAKLFHPEQLISGK 96
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 68.5 bits (160), Expect = 6e-13
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G + A + FF + Y+PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGK 94
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 68.5 bits (160), Expect = 6e-13
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHGI P G + +R +V++ +A Y+PRA L+DLEP
Sbjct: 13 GNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEPGT 72
Query: 190 IHSILNSPYAKLYNPEN 240
+ S+ P+ +L+ P+N
Sbjct: 73 MDSVRAGPFGQLFRPDN 89
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 68.5 bits (160), Expect = 6e-13
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G + A + FF + Y+PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGK 94
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 66.1 bits (154), Expect = 3e-12
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G + ++ + FF Y+PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEP 70
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGK 94
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 66.1 bits (154), Expect = 3e-12
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGS--DRKDVFFYQADDDHYIPRAVLLDL 177
+ G IG W+ C+EHGI P+G + S G D FF + ++PRAV++DL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI I Y L++PE + K
Sbjct: 71 EPTVIDEIRTGTYRSLFHPEQLITGK 96
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 66.1 bits (154), Expect = 3e-12
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGS--DRKDVFFYQADDDHYIPRAVLLDL 177
+ G IG W+ C+EHGI P+G + S G D FF + ++PRAV++DL
Sbjct: 10 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 69
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI I Y L++PE + K
Sbjct: 70 EPTVIDEIRTGTYRSLFHPEQLITGK 95
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 66.1 bits (154), Expect = 3e-12
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G + ++ + FF Y+PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEP 70
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 71 TVVDEIRTGTYKKLFHPEQMITGK 94
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 66.1 bits (154), Expect = 3e-12
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGS--DRKDVFFYQADDDHYIPRAVLLDL 177
+ G IG W+ C+EHGI P+G + S G D FF + ++PRAV++DL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI I Y L++PE + K
Sbjct: 71 EPTVIDEIRTGTYRSLFHPEQLITGK 96
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 66.1 bits (154), Expect = 3e-12
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGS--DRKDVFFYQADDDHYIPRAVLLDL 177
+ G IG W+ C+EHGI P+G + S G D FF + ++PRAV++DL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 70
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP VI I Y L++PE + K
Sbjct: 71 EPTVIDEIRTGTYRSLFHPEQLITGK 96
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 64.5 bits (150), Expect = 1e-11
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHG+ +G + + +R ++ + + Y+PRA+L+DL+P
Sbjct: 13 GNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPES 72
Query: 190 IHSILNSPYAKLYNPEN 240
I+ + ++ Y KL++PEN
Sbjct: 73 INYVRSTQYGKLFDPEN 89
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 64.5 bits (150), Expect = 1e-11
Identities = 26/77 (33%), Positives = 48/77 (62%)
Frame = +1
Query: 10 GNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRV 189
GN IG +FW+ + EHG+ +G + + +R ++ + + Y+PRA+L+DL+P
Sbjct: 13 GNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDPES 72
Query: 190 IHSILNSPYAKLYNPEN 240
I+ + ++ Y KL++PEN
Sbjct: 73 INYVRSTQYGKLFDPEN 89
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 64.1 bits (149), Expect = 1e-11
Identities = 28/84 (33%), Positives = 42/84 (50%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G + FF + Y+PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 71 TVVDEIRTGNYKKLFHPEQMITGK 94
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 64.1 bits (149), Expect = 1e-11
Identities = 28/84 (33%), Positives = 42/84 (50%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G + FF + Y+PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 71 TVVDEIRTGNYKKLFHPEQMITGK 94
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 63.7 bits (148), Expect = 2e-11
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAG--SDRKDVFFYQADDDHYIPRAVLLDL 177
+ G +G W+ C+EHGI P+G++ E S G D + FF + ++PRA+++DL
Sbjct: 16 QAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDL 75
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP I I Y L++PE + K
Sbjct: 76 EPTPIDEIRTGTYKTLFHPEQLLTGK 101
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 61.3 bits (142), Expect = 9e-11
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGIL-EEFASAGSDRKDVFFYQADDDHYIPRAVLLDLE 180
+ G IG W+ CIEHG+ G L EE + FF ++ + ++PRA+ +DLE
Sbjct: 15 QAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLE 74
Query: 181 PRVIHSILNSPYAKLYNPENVYLSK 255
P V+ I N Y L++P+ + K
Sbjct: 75 PTVLDEIRNGVYGNLFHPDQIINGK 99
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 60.5 bits (140), Expect = 2e-10
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEP 183
+ G IG W+ C+EHGI P+G E S FF ++PR++ +DLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGILPDGTSME-PDGNSGSLGTFFSDTGYGRHVPRSIFVDLEP 69
Query: 184 RVIHSILNSPYAKLYNPENVYLSK 255
V+ I Y KL++PE + K
Sbjct: 70 TVVDEIRTGAYKKLFHPEQMLTGK 93
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 57.2 bits (132), Expect = 2e-09
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 RGGNPIGFEFWKQLCIEHGISPEG--ILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDL 177
+ G IG W+ C+EHGI P+G + ++ ++ + FF + ++PR + +DL
Sbjct: 17 QAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDL 76
Query: 178 EPRVIHSILNSPYAKLYNPENVYLSK 255
EP V+ + Y L++PE + K
Sbjct: 77 EPTVVDEVRTGTYRSLFHPEQLLSGK 102
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 50.4 bits (115), Expect = 2e-07
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 CIEHGISPEG--ILEEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRVIHSILNSPYA 219
C+EHGI P+G + ++ ++ + FF + ++PR + +DLEP V+ + Y
Sbjct: 3 CLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYR 62
Query: 220 KLYNPENVYLSK 255
L++PE + K
Sbjct: 63 SLFHPEQLLSGK 74
>U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin receptor
precursor protein.
Length = 445
Score = 28.3 bits (60), Expect = 0.80
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 134 LMMITIYLGLYCSI*NPVLYIVF*THLMLSC--IIQRMCI 247
L +T++LG S NP++Y VF + II+RMC+
Sbjct: 402 LEQVTLWLGYLNSALNPIIYTVFSQDFRAAFKRIIKRMCL 441
>AC084154-13|AAK29875.2| 445|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 4 protein.
Length = 445
Score = 28.3 bits (60), Expect = 0.80
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 134 LMMITIYLGLYCSI*NPVLYIVF*THLMLSC--IIQRMCI 247
L +T++LG S NP++Y VF + II+RMC+
Sbjct: 402 LEQVTLWLGYLNSALNPIIYTVFSQDFRAAFKRIIKRMCL 441
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 16 PIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQAD 138
P+G F + I+ I P GI++ F + S + ++ D
Sbjct: 798 PVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLD 838
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 16 PIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQAD 138
P+G F + I+ I P GI++ F + S + ++ D
Sbjct: 798 PVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLD 838
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 16 PIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQAD 138
P+G F + I+ I P GI++ F + S + ++ D
Sbjct: 798 PVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLD 838
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 166 LLDLEPRVIHSILNSPYAKLYN 231
LLDLEP I ++ NS + +YN
Sbjct: 936 LLDLEPLPIKTLKNSKFEAIYN 957
>Z75547-2|CAA99909.2| 622|Caenorhabditis elegans Hypothetical
protein R11D1.1b protein.
Length = 622
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 55 HGISPEGILEEFASAGSDRKDVFFYQADDDHYIPR 159
HG E + EE +S SD D+ +ADD+HY R
Sbjct: 474 HGDDEEDV-EESSSEDSD--DMMDNEADDNHYFRR 505
>Z75547-1|CAA99908.2| 621|Caenorhabditis elegans Hypothetical
protein R11D1.1a protein.
Length = 621
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 55 HGISPEGILEEFASAGSDRKDVFFYQADDDHYIPR 159
HG E + EE +S SD D+ +ADD+HY R
Sbjct: 473 HGDDEEDV-EESSSEDSD--DMMDNEADDNHYFRR 504
>U97012-7|AAK39139.2| 387|Caenorhabditis elegans Hypothetical
protein C04E6.4 protein.
Length = 387
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 20 SVSNFGNSYV*NMEYHPRAFWRSSLQLDRIVKMYSFIKLMMITIY 154
+ N +S N HP A W +S + M IK M+T Y
Sbjct: 38 NTKNVWDSLFSNGSNHPAAIWMNSWSEEEARTMKCEIKSTMVTCY 82
>CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical
protein C50E10.1 protein.
Length = 122
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 92 ANSSKMPSGDIPCSIHNCFQN 30
A SS P +IPC NC+ N
Sbjct: 70 ATSSTSPEEEIPCICFNCWGN 90
>Z92830-7|CAB07360.1| 659|Caenorhabditis elegans Hypothetical
protein F11A5.8 protein.
Length = 659
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 14 TQSVSNFGNSYV*NMEYHPRA 76
T S+ GNSYV N+E H RA
Sbjct: 433 TVSIMMAGNSYVTNLEGHIRA 453
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 52 EHGISPEGILEEFASAGSDRKDVFFYQADDDHY 150
E+ I+P I E F+SA +K+V Y + +HY
Sbjct: 162 ENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHY 194
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 52 EHGISPEGILEEFASAGSDRKDVFFYQADDDHY 150
E+ I+P I E F+SA +K+V Y + +HY
Sbjct: 170 ENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHY 202
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 52 EHGISPEGILEEFASAGSDRKDVFFYQADDDHY 150
E+ I+P I E F+SA +K+V Y + +HY
Sbjct: 162 ENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHY 194
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 52 EHGISPEGILEEFASAGSDRKDVFFYQADDDHY 150
E+ I+P I E F+SA +K+V Y + +HY
Sbjct: 170 ENPIAPYPIDESFSSAFQVKKEVDAYGYNFEHY 202
>AF077540-7|AAC26307.2| 314|Caenorhabditis elegans Hypothetical
protein T07H3.6 protein.
Length = 314
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 2 HEVETQSVSNFGNSYV*NMEYHPRAFWRSSLQLD 103
H ++ S N GN+Y ++E H W S D
Sbjct: 28 HRIKNISTLNIGNTYTSDVEDHFGFLWHLSYIYD 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,503,191
Number of Sequences: 27780
Number of extensions: 119958
Number of successful extensions: 392
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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