Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_A05
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   4.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   4.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   4.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   4.9  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   6.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.5  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 31  PSSTKSSNTGCITY 72
           PSSTKS + G +TY
Sbjct: 75  PSSTKSGSPGFLTY 88


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 115 WHGWINPCTSCY 150
           W    NPCT+C+
Sbjct: 686 WTSSDNPCTTCF 697


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 173 YKYTANMRNPPAPQ 214
           Y YT +   PP+PQ
Sbjct: 48  YGYTGSEETPPSPQ 61


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 481 SLLFSLMGLQHSYCFI 434
           +LLFS+ G   SY FI
Sbjct: 268 ALLFSICGAASSYLFI 283


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 173 YKYTANMRNPPAPQ 214
           Y YT +   PP+PQ
Sbjct: 48  YGYTGSEETPPSPQ 61


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 173 YKYTANMRNPPAPQ 214
           Y YT +   PP+PQ
Sbjct: 48  YGYTGSEETPPSPQ 61


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 422 SEILHALTYEEAQNCQFLK 366
           SE L    +EE  N QFLK
Sbjct: 121 SETLTRAKFEELNNDQFLK 139


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 502 SQLVFLCSLLFSLMGLQ 452
           SQLVF+C  +  L G Q
Sbjct: 219 SQLVFMCKKINKLYGHQ 235


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 322 SKNASRFGW*NNWY 363
           SK+ SR+G  +NW+
Sbjct: 72  SKSGSRYGRRSNWF 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,649
Number of Sequences: 336
Number of extensions: 2391
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)