Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_A05
         (515 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           26   0.66 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   2.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.1  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 74  SLGARPITGQQGVAGTAGSIRAPL-VTQSSRPAGYKYTANMRNPPAPQPAVHIQGQEXXX 250
           S+G  P TG  G A  +GS+ A   V+   +  GY   +N ++  A  PA   Q Q    
Sbjct: 347 SMGNDPQTGMGGPASMSGSLSATSPVSPHLQQNGYVSASNGQSAQAGGPAGG-QAQPSQS 405

Query: 251 XXXXXXXXXQEQKQ 292
                    Q+Q+Q
Sbjct: 406 AAQQYQPQQQQQQQ 419


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 164 PAGYKYTANMRNPPAPQP 217
           PAG+    N + PPAP P
Sbjct: 570 PAGFPNLPNAQPPPAPPP 587


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 251 PLMVPGPVCELQAAELEDFAYLQCIY 174
           P +  G  C++ AA   D A L+C++
Sbjct: 367 PKLSQGHKCDVVAATFLDVAVLRCLF 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,401
Number of Sequences: 2352
Number of extensions: 10061
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)