Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_A05
(515 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-bindin... 124 5e-29
AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p pro... 124 5e-29
AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH... 124 5e-29
AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG... 124 5e-29
AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF... 124 5e-29
AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE... 124 5e-29
AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD... 124 5e-29
AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC... 124 5e-29
AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB... 124 5e-29
AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA... 124 5e-29
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d... 54 1e-07
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA... 54 1e-07
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 28 6.5
AY069641-1|AAL39786.1| 625|Drosophila melanogaster LD40707p pro... 28 6.5
AE014298-1441|AAF46578.1| 625|Drosophila melanogaster CG2221-PA... 28 6.5
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 28 6.5
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 28 6.5
>L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-binding
protein protein.
Length = 632
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 489 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 548
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 549 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 608
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 609 EALKAKVEEAVAVL 622
>AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p
protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH,
isoform H protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG,
isoform G protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF,
isoform F protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE,
isoform E protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD,
isoform D protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC,
isoform C protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB,
isoform B protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA,
isoform A protein.
Length = 634
Score = 124 bits (300), Expect = 5e-29
Identities = 73/134 (54%), Positives = 88/134 (65%), Gaps = 9/134 (6%)
Frame = +2
Query: 80 GARPITGQQGVAGTAGSIRAPLVTQSS-RPAGYKYTANMRNPPAPQ-----PAVH-IQGQ 238
GAR ITGQQ A A + + R + YKYT+NMRNPP PQ P +QG+
Sbjct: 491 GARAITGQQTAAPNMQIPGAQIAGGAQQRTSNYKYTSNMRNPPVPQLHQTQPIPQQLQGK 550
Query: 239 --EXXXXXXXXXXXXQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHG 412
E QEQKQ+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E
Sbjct: 551 NSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQ 610
Query: 413 ESLKAKVDEAVAVL 454
E+LKAKV+EAVAVL
Sbjct: 611 EALKAKVEEAVAVL 624
>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
protein protein.
Length = 2895
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +2
Query: 290 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVL 454
Q +GERL+P I ++ A KITGMLLEI +LL ++ E+L+ KV+EA+ ++
Sbjct: 2512 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEII 2566
>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
protein.
Length = 2885
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +2
Query: 290 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVL 454
Q +GERL+P I ++ A KITGMLLEI +LL ++ E+L+ KV+EA+ ++
Sbjct: 2502 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEII 2556
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 100 TTRCCWHGWINPCTSCY 150
+ +C W + NPCT CY
Sbjct: 724 SNQCPWSWYYNPCTGCY 740
>AY069641-1|AAL39786.1| 625|Drosophila melanogaster LD40707p
protein.
Length = 625
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 61 CITYFS-RSKTNHRTT-RCCWHGWINPCTSCYSKQPSSWL*IHCK 189
C+ Y S NH TT C W +N C++ ++ WL + C+
Sbjct: 422 CLGYNDCNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGCE 466
>AE014298-1441|AAF46578.1| 625|Drosophila melanogaster CG2221-PA
protein.
Length = 625
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 61 CITYFS-RSKTNHRTT-RCCWHGWINPCTSCYSKQPSSWL*IHCK 189
C+ Y S NH TT C W +N C++ ++ WL + C+
Sbjct: 422 CLGYNDCNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGCE 466
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 100 TTRCCWHGWINPCTSCY 150
+ +C W + NPCT CY
Sbjct: 123 SNQCPWSWYYNPCTGCY 139
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 100 TTRCCWHGWINPCTSCY 150
+ +C W + NPCT CY
Sbjct: 724 SNQCPWSWYYNPCTGCY 740
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,327,896
Number of Sequences: 53049
Number of extensions: 440073
Number of successful extensions: 1508
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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