Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_A03
         (431 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03062-1|CAA26868.1|  197|Drosophila melanogaster put. cad fragm...    27   8.2  
M21070-1|AAA28409.1|  472|Drosophila melanogaster protein ( D.me...    27   8.2  
AY069565-1|AAL39710.1|  427|Drosophila melanogaster LD29596p pro...    27   8.2  
AE014134-3283|AAN11088.1|  427|Drosophila melanogaster CG1759-PB...    27   8.2  
AE014134-3282|AAF53923.1|  427|Drosophila melanogaster CG1759-PA...    27   8.2  

>X03062-1|CAA26868.1|  197|Drosophila melanogaster put. cad
          fragment protein.
          Length = 197

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 9  NNNNSN*DHPTHEN*KKNNEIS 74
          NNNN+N    TH N   NN +S
Sbjct: 7  NNNNNNNSPSTHNNNNNNNSVS 28


>M21070-1|AAA28409.1|  472|Drosophila melanogaster protein (
           D.melanogaster caudalgene (cad) encoding a maternal and
           zygotic transcript,exon 2. ).
          Length = 472

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 9   NNNNSN*DHPTHEN*KKNNEIS 74
           NNNN+N    TH N   NN +S
Sbjct: 189 NNNNNNNSPSTHNNNNNNNSVS 210


>AY069565-1|AAL39710.1|  427|Drosophila melanogaster LD29596p
           protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 9   NNNNSN*DHPTHEN*KKNNEIS 74
           NNNN+N    TH N   NN +S
Sbjct: 219 NNNNNNNSPSTHNNNNNNNSVS 240


>AE014134-3283|AAN11088.1|  427|Drosophila melanogaster CG1759-PB,
           isoform B protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 9   NNNNSN*DHPTHEN*KKNNEIS 74
           NNNN+N    TH N   NN +S
Sbjct: 219 NNNNNNNSPSTHNNNNNNNSVS 240


>AE014134-3282|AAF53923.1|  427|Drosophila melanogaster CG1759-PA,
           isoform A protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 9   NNNNSN*DHPTHEN*KKNNEIS 74
           NNNN+N    TH N   NN +S
Sbjct: 219 NNNNNNNSPSTHNNNNNNNSVS 240


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,400,226
Number of Sequences: 53049
Number of extensions: 167849
Number of successful extensions: 599
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)